Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Depdc1bQ8BH88 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Depdc1bQ8BH88 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Depdc1bQ8BH88 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Depdc1bQ8BH88 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.8■■□□□ 1.88
Depdc1bQ8BH88 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Depdc1bQ8BH88 Gm9397-201ENSMUST00000200125 605 ntBASIC26.79■■□□□ 1.88
Depdc1bQ8BH88 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Depdc1bQ8BH88 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Depdc1bQ8BH88 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Depdc1bQ8BH88 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Depdc1bQ8BH88 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Depdc1bQ8BH88 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Depdc1bQ8BH88 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Depdc1bQ8BH88 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.73■■□□□ 1.87
Depdc1bQ8BH88 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Depdc1bQ8BH88 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.71■■□□□ 1.87
Depdc1bQ8BH88 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Depdc1bQ8BH88 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Depdc1bQ8BH88 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.68■■□□□ 1.86
Depdc1bQ8BH88 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.68■■□□□ 1.86
Depdc1bQ8BH88 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Depdc1bQ8BH88 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Depdc1bQ8BH88 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.67■■□□□ 1.86
Depdc1bQ8BH88 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Depdc1bQ8BH88 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Depdc1bQ8BH88 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.66■■□□□ 1.86
Depdc1bQ8BH88 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.66■■□□□ 1.86
Depdc1bQ8BH88 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Depdc1bQ8BH88 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.64■■□□□ 1.86
Depdc1bQ8BH88 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Depdc1bQ8BH88 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Depdc1bQ8BH88 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.63■■□□□ 1.85
Depdc1bQ8BH88 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Depdc1bQ8BH88 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Depdc1bQ8BH88 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Depdc1bQ8BH88 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.61■■□□□ 1.85
Depdc1bQ8BH88 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Depdc1bQ8BH88 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Depdc1bQ8BH88 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Depdc1bQ8BH88 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Depdc1bQ8BH88 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Depdc1bQ8BH88 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Depdc1bQ8BH88 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Depdc1bQ8BH88 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.58■■□□□ 1.85
Depdc1bQ8BH88 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.58■■□□□ 1.84
Depdc1bQ8BH88 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.57■■□□□ 1.84
Depdc1bQ8BH88 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.57■■□□□ 1.84
Depdc1bQ8BH88 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Depdc1bQ8BH88 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
Depdc1bQ8BH88 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Depdc1bQ8BH88 Amer2-203ENSMUST00000225247 2662 ntBASIC26.55■■□□□ 1.84
Depdc1bQ8BH88 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Depdc1bQ8BH88 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Depdc1bQ8BH88 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Depdc1bQ8BH88 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Depdc1bQ8BH88 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Depdc1bQ8BH88 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.54■■□□□ 1.84
Depdc1bQ8BH88 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.54■■□□□ 1.84
Depdc1bQ8BH88 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Depdc1bQ8BH88 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Depdc1bQ8BH88 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
Depdc1bQ8BH88 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Depdc1bQ8BH88 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Depdc1bQ8BH88 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Depdc1bQ8BH88 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Depdc1bQ8BH88 Gm24970-201ENSMUST00000175582 82 ntBASIC26.5■■□□□ 1.83
Depdc1bQ8BH88 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Depdc1bQ8BH88 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Depdc1bQ8BH88 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Depdc1bQ8BH88 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Depdc1bQ8BH88 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Depdc1bQ8BH88 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.47■■□□□ 1.83
Depdc1bQ8BH88 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Depdc1bQ8BH88 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Depdc1bQ8BH88 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.83
Depdc1bQ8BH88 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
Depdc1bQ8BH88 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Depdc1bQ8BH88 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Depdc1bQ8BH88 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Depdc1bQ8BH88 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.44■■□□□ 1.82
Depdc1bQ8BH88 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Depdc1bQ8BH88 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.43■■□□□ 1.82
Depdc1bQ8BH88 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
Depdc1bQ8BH88 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
Depdc1bQ8BH88 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Depdc1bQ8BH88 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.41■■□□□ 1.82
Depdc1bQ8BH88 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.41■■□□□ 1.82
Depdc1bQ8BH88 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Depdc1bQ8BH88 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.41■■□□□ 1.82
Depdc1bQ8BH88 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Depdc1bQ8BH88 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Depdc1bQ8BH88 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Depdc1bQ8BH88 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Depdc1bQ8BH88 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
Depdc1bQ8BH88 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Depdc1bQ8BH88 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Depdc1bQ8BH88 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Depdc1bQ8BH88 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Depdc1bQ8BH88 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms