Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zfp248Q640N4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Zfp248Q640N4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zfp248Q640N4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zfp248Q640N4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zfp248Q640N4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zfp248Q640N4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Zfp248Q640N4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Zfp248Q640N4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Zfp248Q640N4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Zfp248Q640N4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zfp248Q640N4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Zfp248Q640N4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Zfp248Q640N4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Zfp248Q640N4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Zfp248Q640N4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Zfp248Q640N4 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Zfp248Q640N4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.64■□□□□ 0.57
Zfp248Q640N4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Zfp248Q640N4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Zfp248Q640N4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Zfp248Q640N4 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Zfp248Q640N4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Zfp248Q640N4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Zfp248Q640N4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zfp248Q640N4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Zfp248Q640N4 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zfp248Q640N4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Zfp248Q640N4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Zfp248Q640N4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zfp248Q640N4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zfp248Q640N4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.58■□□□□ 0.57
Zfp248Q640N4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Zfp248Q640N4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Zfp248Q640N4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Zfp248Q640N4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.56■□□□□ 0.56
Zfp248Q640N4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zfp248Q640N4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.55■□□□□ 0.56
Zfp248Q640N4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Zfp248Q640N4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.55■□□□□ 0.56
Zfp248Q640N4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zfp248Q640N4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zfp248Q640N4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Zfp248Q640N4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Zfp248Q640N4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zfp248Q640N4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Zfp248Q640N4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Zfp248Q640N4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Zfp248Q640N4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Zfp248Q640N4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Zfp248Q640N4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Zfp248Q640N4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zfp248Q640N4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zfp248Q640N4 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.51■□□□□ 0.55
Zfp248Q640N4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Zfp248Q640N4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zfp248Q640N4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zfp248Q640N4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zfp248Q640N4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zfp248Q640N4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zfp248Q640N4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Zfp248Q640N4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zfp248Q640N4 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Zfp248Q640N4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.48■□□□□ 0.55
Zfp248Q640N4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zfp248Q640N4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Zfp248Q640N4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zfp248Q640N4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Zfp248Q640N4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zfp248Q640N4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zfp248Q640N4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zfp248Q640N4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Zfp248Q640N4 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Zfp248Q640N4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.46■□□□□ 0.55
Zfp248Q640N4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Zfp248Q640N4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Zfp248Q640N4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.46■□□□□ 0.55
Zfp248Q640N4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Zfp248Q640N4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Zfp248Q640N4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Zfp248Q640N4 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.45■□□□□ 0.54
Zfp248Q640N4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Zfp248Q640N4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zfp248Q640N4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zfp248Q640N4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zfp248Q640N4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Zfp248Q640N4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Zfp248Q640N4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Zfp248Q640N4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zfp248Q640N4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Zfp248Q640N4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.42■□□□□ 0.54
Zfp248Q640N4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zfp248Q640N4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp248Q640N4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp248Q640N4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp248Q640N4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp248Q640N4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp248Q640N4 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp248Q640N4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp248Q640N4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms