Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zfp248Q640N4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Zfp248Q640N4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zfp248Q640N4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zfp248Q640N4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zfp248Q640N4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zfp248Q640N4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Zfp248Q640N4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Zfp248Q640N4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Zfp248Q640N4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Zfp248Q640N4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zfp248Q640N4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Zfp248Q640N4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Zfp248Q640N4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Zfp248Q640N4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Zfp248Q640N4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Zfp248Q640N4 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Zfp248Q640N4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.64■□□□□ 0.57
Zfp248Q640N4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Zfp248Q640N4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Zfp248Q640N4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Zfp248Q640N4 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Zfp248Q640N4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Zfp248Q640N4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Zfp248Q640N4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zfp248Q640N4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Zfp248Q640N4 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zfp248Q640N4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Zfp248Q640N4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Zfp248Q640N4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zfp248Q640N4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zfp248Q640N4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.58■□□□□ 0.57
Zfp248Q640N4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Zfp248Q640N4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Zfp248Q640N4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Zfp248Q640N4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.56■□□□□ 0.56
Zfp248Q640N4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zfp248Q640N4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.55■□□□□ 0.56
Zfp248Q640N4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Zfp248Q640N4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.55■□□□□ 0.56
Zfp248Q640N4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zfp248Q640N4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zfp248Q640N4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Zfp248Q640N4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Zfp248Q640N4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zfp248Q640N4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Zfp248Q640N4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Zfp248Q640N4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Zfp248Q640N4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Zfp248Q640N4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Zfp248Q640N4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Zfp248Q640N4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zfp248Q640N4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zfp248Q640N4 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.51■□□□□ 0.55
Zfp248Q640N4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Zfp248Q640N4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zfp248Q640N4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zfp248Q640N4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zfp248Q640N4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zfp248Q640N4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zfp248Q640N4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Zfp248Q640N4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zfp248Q640N4 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Zfp248Q640N4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.48■□□□□ 0.55
Zfp248Q640N4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zfp248Q640N4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Zfp248Q640N4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zfp248Q640N4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Zfp248Q640N4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zfp248Q640N4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zfp248Q640N4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zfp248Q640N4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Zfp248Q640N4 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Zfp248Q640N4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.46■□□□□ 0.55
Zfp248Q640N4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Zfp248Q640N4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Zfp248Q640N4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.46■□□□□ 0.55
Zfp248Q640N4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Zfp248Q640N4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Zfp248Q640N4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Zfp248Q640N4 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.45■□□□□ 0.54
Zfp248Q640N4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Zfp248Q640N4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zfp248Q640N4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zfp248Q640N4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zfp248Q640N4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Zfp248Q640N4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Zfp248Q640N4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Zfp248Q640N4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zfp248Q640N4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Zfp248Q640N4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.42■□□□□ 0.54
Zfp248Q640N4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zfp248Q640N4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp248Q640N4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp248Q640N4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp248Q640N4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp248Q640N4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp248Q640N4 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp248Q640N4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp248Q640N4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms