Protein–RNA interactions for Protein: Q61657

Hes3, Transcription factor HES-3, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes3Q61657 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hes3Q61657 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.22■□□□□ 0.99
Hes3Q61657 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Hes3Q61657 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.21■□□□□ 0.99
Hes3Q61657 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hes3Q61657 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Hes3Q61657 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hes3Q61657 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hes3Q61657 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hes3Q61657 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hes3Q61657 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hes3Q61657 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hes3Q61657 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hes3Q61657 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.19■□□□□ 0.98
Hes3Q61657 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hes3Q61657 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hes3Q61657 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Hes3Q61657 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.17■□□□□ 0.98
Hes3Q61657 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.17■□□□□ 0.98
Hes3Q61657 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Hes3Q61657 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
Hes3Q61657 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.17■□□□□ 0.98
Hes3Q61657 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hes3Q61657 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hes3Q61657 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hes3Q61657 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.15■□□□□ 0.98
Hes3Q61657 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Hes3Q61657 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hes3Q61657 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hes3Q61657 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hes3Q61657 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hes3Q61657 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.11■□□□□ 0.97
Hes3Q61657 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hes3Q61657 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hes3Q61657 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.1■□□□□ 0.97
Hes3Q61657 Gm16148-201ENSMUST00000119653 893 ntBASIC21.09■□□□□ 0.97
Hes3Q61657 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.09■□□□□ 0.97
Hes3Q61657 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hes3Q61657 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hes3Q61657 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Hes3Q61657 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Hes3Q61657 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.07■□□□□ 0.96
Hes3Q61657 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hes3Q61657 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hes3Q61657 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hes3Q61657 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hes3Q61657 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hes3Q61657 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Hes3Q61657 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hes3Q61657 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hes3Q61657 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
Hes3Q61657 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Hes3Q61657 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hes3Q61657 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Hes3Q61657 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.01■□□□□ 0.95
Hes3Q61657 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hes3Q61657 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hes3Q61657 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Hes3Q61657 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hes3Q61657 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Hes3Q61657 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hes3Q61657 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.98■□□□□ 0.95
Hes3Q61657 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hes3Q61657 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
Hes3Q61657 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hes3Q61657 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hes3Q61657 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Hes3Q61657 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hes3Q61657 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hes3Q61657 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hes3Q61657 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hes3Q61657 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Hes3Q61657 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Hes3Q61657 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hes3Q61657 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hes3Q61657 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hes3Q61657 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hes3Q61657 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hes3Q61657 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.92■□□□□ 0.94
Hes3Q61657 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hes3Q61657 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hes3Q61657 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hes3Q61657 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hes3Q61657 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hes3Q61657 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hes3Q61657 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hes3Q61657 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Hes3Q61657 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hes3Q61657 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hes3Q61657 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hes3Q61657 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hes3Q61657 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.88■□□□□ 0.93
Hes3Q61657 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hes3Q61657 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hes3Q61657 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hes3Q61657 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hes3Q61657 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hes3Q61657 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hes3Q61657 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hes3Q61657 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms