Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trav6d-4Q5R1I0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Trav6d-4Q5R1I0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trav6d-4Q5R1I0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Trav6d-4Q5R1I0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trav6d-4Q5R1I0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trav6d-4Q5R1I0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trav6d-4Q5R1I0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav6d-4Q5R1I0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Trav6d-4Q5R1I0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav6d-4Q5R1I0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav6d-4Q5R1I0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trav6d-4Q5R1I0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21■□□□□ 0.95
Trav6d-4Q5R1I0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Trav6d-4Q5R1I0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trav6d-4Q5R1I0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.99■□□□□ 0.95
Trav6d-4Q5R1I0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Trav6d-4Q5R1I0 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.98■□□□□ 0.95
Trav6d-4Q5R1I0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav6d-4Q5R1I0 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.97■□□□□ 0.95
Trav6d-4Q5R1I0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trav6d-4Q5R1I0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trav6d-4Q5R1I0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trav6d-4Q5R1I0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.96■□□□□ 0.95
Trav6d-4Q5R1I0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trav6d-4Q5R1I0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trav6d-4Q5R1I0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trav6d-4Q5R1I0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trav6d-4Q5R1I0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trav6d-4Q5R1I0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trav6d-4Q5R1I0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trav6d-4Q5R1I0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trav6d-4Q5R1I0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trav6d-4Q5R1I0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trav6d-4Q5R1I0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trav6d-4Q5R1I0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trav6d-4Q5R1I0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trav6d-4Q5R1I0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trav6d-4Q5R1I0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.89■□□□□ 0.93
Trav6d-4Q5R1I0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.88■□□□□ 0.93
Trav6d-4Q5R1I0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Trav6d-4Q5R1I0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trav6d-4Q5R1I0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trav6d-4Q5R1I0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trav6d-4Q5R1I0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav6d-4Q5R1I0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav6d-4Q5R1I0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trav6d-4Q5R1I0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.83■□□□□ 0.93
Trav6d-4Q5R1I0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.83■□□□□ 0.93
Trav6d-4Q5R1I0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.82■□□□□ 0.92
Trav6d-4Q5R1I0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav6d-4Q5R1I0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.81■□□□□ 0.92
Trav6d-4Q5R1I0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav6d-4Q5R1I0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Trav6d-4Q5R1I0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav6d-4Q5R1I0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav6d-4Q5R1I0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Trav6d-4Q5R1I0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav6d-4Q5R1I0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav6d-4Q5R1I0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trav6d-4Q5R1I0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Trav6d-4Q5R1I0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Trav6d-4Q5R1I0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trav6d-4Q5R1I0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.76■□□□□ 0.91
Trav6d-4Q5R1I0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav6d-4Q5R1I0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Trav6d-4Q5R1I0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav6d-4Q5R1I0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav6d-4Q5R1I0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav6d-4Q5R1I0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav6d-4Q5R1I0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav6d-4Q5R1I0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav6d-4Q5R1I0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav6d-4Q5R1I0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav6d-4Q5R1I0 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.71■□□□□ 0.91
Trav6d-4Q5R1I0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav6d-4Q5R1I0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav6d-4Q5R1I0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trav6d-4Q5R1I0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav6d-4Q5R1I0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trav6d-4Q5R1I0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav6d-4Q5R1I0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trav6d-4Q5R1I0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trav6d-4Q5R1I0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trav6d-4Q5R1I0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Trav6d-4Q5R1I0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav6d-4Q5R1I0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Trav6d-4Q5R1I0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.65■□□□□ 0.9
Trav6d-4Q5R1I0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Trav6d-4Q5R1I0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trav6d-4Q5R1I0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav6d-4Q5R1I0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.63■□□□□ 0.89
Trav6d-4Q5R1I0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.63■□□□□ 0.89
Trav6d-4Q5R1I0 Zxda-201ENSMUST00000117281 2621 ntBASIC20.63■□□□□ 0.89
Trav6d-4Q5R1I0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav6d-4Q5R1I0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav6d-4Q5R1I0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.62■□□□□ 0.89
Trav6d-4Q5R1I0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav6d-4Q5R1I0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trav6d-4Q5R1I0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 124.1 ms