Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Lin28bQ45KJ6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Lin28bQ45KJ6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Lin28bQ45KJ6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.81■■□□□ 1.4
Lin28bQ45KJ6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Lin28bQ45KJ6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Lin28bQ45KJ6 Gm6821-201ENSMUST00000107540 542 ntBASIC23.78■■□□□ 1.4
Lin28bQ45KJ6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Lin28bQ45KJ6 Gm8503-201ENSMUST00000118131 455 ntBASIC23.77■■□□□ 1.4
Lin28bQ45KJ6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.77■■□□□ 1.4
Lin28bQ45KJ6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.77■■□□□ 1.4
Lin28bQ45KJ6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Lin28bQ45KJ6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Lin28bQ45KJ6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Lin28bQ45KJ6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Lin28bQ45KJ6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Lin28bQ45KJ6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Lin28bQ45KJ6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Lin28bQ45KJ6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Lin28bQ45KJ6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Lin28bQ45KJ6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Lin28bQ45KJ6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Lin28bQ45KJ6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.7■■□□□ 1.39
Lin28bQ45KJ6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.7■■□□□ 1.38
Lin28bQ45KJ6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Lin28bQ45KJ6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Lin28bQ45KJ6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Lin28bQ45KJ6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Lin28bQ45KJ6 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.69■■□□□ 1.38
Lin28bQ45KJ6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Lin28bQ45KJ6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Lin28bQ45KJ6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.67■■□□□ 1.38
Lin28bQ45KJ6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Lin28bQ45KJ6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Lin28bQ45KJ6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Lin28bQ45KJ6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Lin28bQ45KJ6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Lin28bQ45KJ6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.66■■□□□ 1.38
Lin28bQ45KJ6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Lin28bQ45KJ6 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.65■■□□□ 1.38
Lin28bQ45KJ6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Lin28bQ45KJ6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Lin28bQ45KJ6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Lin28bQ45KJ6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
Lin28bQ45KJ6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Lin28bQ45KJ6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Lin28bQ45KJ6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Lin28bQ45KJ6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.59■■□□□ 1.37
Lin28bQ45KJ6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Lin28bQ45KJ6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Lin28bQ45KJ6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Lin28bQ45KJ6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Lin28bQ45KJ6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.57■■□□□ 1.36
Lin28bQ45KJ6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.57■■□□□ 1.36
Lin28bQ45KJ6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Lin28bQ45KJ6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Lin28bQ45KJ6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Lin28bQ45KJ6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Lin28bQ45KJ6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Lin28bQ45KJ6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Lin28bQ45KJ6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.53■■□□□ 1.36
Lin28bQ45KJ6 Nkain2-201ENSMUST00000092602 558 ntBASIC23.53■■□□□ 1.36
Lin28bQ45KJ6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Lin28bQ45KJ6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Lin28bQ45KJ6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Lin28bQ45KJ6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Lin28bQ45KJ6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Lin28bQ45KJ6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Lin28bQ45KJ6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Lin28bQ45KJ6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Lin28bQ45KJ6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Lin28bQ45KJ6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Lin28bQ45KJ6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Lin28bQ45KJ6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Lin28bQ45KJ6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Lin28bQ45KJ6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.46■■□□□ 1.35
Lin28bQ45KJ6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Lin28bQ45KJ6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Lin28bQ45KJ6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Lin28bQ45KJ6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.44■■□□□ 1.34
Lin28bQ45KJ6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Lin28bQ45KJ6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Lin28bQ45KJ6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Lin28bQ45KJ6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.41■■□□□ 1.34
Lin28bQ45KJ6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.41■■□□□ 1.34
Lin28bQ45KJ6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
Lin28bQ45KJ6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.41■■□□□ 1.34
Lin28bQ45KJ6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.4■■□□□ 1.34
Lin28bQ45KJ6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.4■■□□□ 1.34
Lin28bQ45KJ6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Lin28bQ45KJ6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.4■■□□□ 1.34
Lin28bQ45KJ6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Lin28bQ45KJ6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Lin28bQ45KJ6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Lin28bQ45KJ6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Lin28bQ45KJ6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Lin28bQ45KJ6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.36■■□□□ 1.33
Lin28bQ45KJ6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Lin28bQ45KJ6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.34■■□□□ 1.33
Lin28bQ45KJ6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms