Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cks1brtQ3UNC9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Cks1brtQ3UNC9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cks1brtQ3UNC9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cks1brtQ3UNC9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cks1brtQ3UNC9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cks1brtQ3UNC9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Cks1brtQ3UNC9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cks1brtQ3UNC9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cks1brtQ3UNC9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cks1brtQ3UNC9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cks1brtQ3UNC9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Cks1brtQ3UNC9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cks1brtQ3UNC9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cks1brtQ3UNC9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cks1brtQ3UNC9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cks1brtQ3UNC9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cks1brtQ3UNC9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC17.82■□□□□ 0.44
Cks1brtQ3UNC9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cks1brtQ3UNC9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cks1brtQ3UNC9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cks1brtQ3UNC9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cks1brtQ3UNC9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cks1brtQ3UNC9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC17.81■□□□□ 0.44
Cks1brtQ3UNC9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cks1brtQ3UNC9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.8■□□□□ 0.44
Cks1brtQ3UNC9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cks1brtQ3UNC9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cks1brtQ3UNC9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cks1brtQ3UNC9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cks1brtQ3UNC9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cks1brtQ3UNC9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cks1brtQ3UNC9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cks1brtQ3UNC9 Gm27325-201ENSMUST00000175467 74 ntBASIC17.77■□□□□ 0.44
Cks1brtQ3UNC9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cks1brtQ3UNC9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cks1brtQ3UNC9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cks1brtQ3UNC9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cks1brtQ3UNC9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cks1brtQ3UNC9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cks1brtQ3UNC9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cks1brtQ3UNC9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC17.73■□□□□ 0.43
Cks1brtQ3UNC9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cks1brtQ3UNC9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cks1brtQ3UNC9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cks1brtQ3UNC9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cks1brtQ3UNC9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cks1brtQ3UNC9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cks1brtQ3UNC9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cks1brtQ3UNC9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cks1brtQ3UNC9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cks1brtQ3UNC9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.69■□□□□ 0.42
Cks1brtQ3UNC9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cks1brtQ3UNC9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cks1brtQ3UNC9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cks1brtQ3UNC9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cks1brtQ3UNC9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cks1brtQ3UNC9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cks1brtQ3UNC9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cks1brtQ3UNC9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cks1brtQ3UNC9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC17.66■□□□□ 0.42
Cks1brtQ3UNC9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cks1brtQ3UNC9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cks1brtQ3UNC9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cks1brtQ3UNC9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC17.65■□□□□ 0.42
Cks1brtQ3UNC9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Cks1brtQ3UNC9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cks1brtQ3UNC9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cks1brtQ3UNC9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cks1brtQ3UNC9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cks1brtQ3UNC9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cks1brtQ3UNC9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cks1brtQ3UNC9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.61■□□□□ 0.41
Cks1brtQ3UNC9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cks1brtQ3UNC9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cks1brtQ3UNC9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cks1brtQ3UNC9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cks1brtQ3UNC9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cks1brtQ3UNC9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cks1brtQ3UNC9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cks1brtQ3UNC9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cks1brtQ3UNC9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cks1brtQ3UNC9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cks1brtQ3UNC9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cks1brtQ3UNC9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cks1brtQ3UNC9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cks1brtQ3UNC9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cks1brtQ3UNC9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cks1brtQ3UNC9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cks1brtQ3UNC9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cks1brtQ3UNC9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cks1brtQ3UNC9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cks1brtQ3UNC9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.53■□□□□ 0.4
Cks1brtQ3UNC9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cks1brtQ3UNC9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cks1brtQ3UNC9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cks1brtQ3UNC9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cks1brtQ3UNC9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cks1brtQ3UNC9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cks1brtQ3UNC9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms