Protein–RNA interactions for Protein: Q3UA16

Spc25, Kinetochore protein Spc25, mousemouse

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spc25Q3UA16 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Spc25Q3UA16 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.39■■□□□ 1.17
Spc25Q3UA16 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
Spc25Q3UA16 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Spc25Q3UA16 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Spc25Q3UA16 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Spc25Q3UA16 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Spc25Q3UA16 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Spc25Q3UA16 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.37■■□□□ 1.17
Spc25Q3UA16 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Spc25Q3UA16 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Spc25Q3UA16 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Spc25Q3UA16 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Spc25Q3UA16 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Spc25Q3UA16 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Spc25Q3UA16 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Spc25Q3UA16 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Spc25Q3UA16 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.34■■□□□ 1.17
Spc25Q3UA16 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.34■■□□□ 1.17
Spc25Q3UA16 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Spc25Q3UA16 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.33■■□□□ 1.17
Spc25Q3UA16 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.33■■□□□ 1.17
Spc25Q3UA16 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
Spc25Q3UA16 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
Spc25Q3UA16 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.32■■□□□ 1.16
Spc25Q3UA16 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.32■■□□□ 1.16
Spc25Q3UA16 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Spc25Q3UA16 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Spc25Q3UA16 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Spc25Q3UA16 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.3■■□□□ 1.16
Spc25Q3UA16 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Spc25Q3UA16 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.3■■□□□ 1.16
Spc25Q3UA16 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Spc25Q3UA16 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.3■■□□□ 1.16
Spc25Q3UA16 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Spc25Q3UA16 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Spc25Q3UA16 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
Spc25Q3UA16 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Spc25Q3UA16 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Spc25Q3UA16 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Spc25Q3UA16 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Spc25Q3UA16 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Spc25Q3UA16 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Spc25Q3UA16 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Spc25Q3UA16 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Spc25Q3UA16 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Spc25Q3UA16 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Spc25Q3UA16 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Spc25Q3UA16 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Spc25Q3UA16 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Spc25Q3UA16 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Spc25Q3UA16 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Spc25Q3UA16 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Spc25Q3UA16 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC22.2■■□□□ 1.14
Spc25Q3UA16 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Spc25Q3UA16 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Spc25Q3UA16 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Spc25Q3UA16 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Spc25Q3UA16 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Spc25Q3UA16 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Spc25Q3UA16 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Spc25Q3UA16 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Spc25Q3UA16 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Spc25Q3UA16 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Spc25Q3UA16 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Spc25Q3UA16 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Spc25Q3UA16 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Spc25Q3UA16 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.12■■□□□ 1.13
Spc25Q3UA16 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Spc25Q3UA16 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
Spc25Q3UA16 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Spc25Q3UA16 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Spc25Q3UA16 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Spc25Q3UA16 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Spc25Q3UA16 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC22.09■■□□□ 1.13
Spc25Q3UA16 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Spc25Q3UA16 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Spc25Q3UA16 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Spc25Q3UA16 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Spc25Q3UA16 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Spc25Q3UA16 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.08■■□□□ 1.13
Spc25Q3UA16 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Spc25Q3UA16 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.07■■□□□ 1.12
Spc25Q3UA16 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC22.07■■□□□ 1.12
Spc25Q3UA16 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Spc25Q3UA16 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Spc25Q3UA16 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Spc25Q3UA16 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Spc25Q3UA16 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Spc25Q3UA16 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Spc25Q3UA16 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Spc25Q3UA16 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Spc25Q3UA16 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.05■■□□□ 1.12
Spc25Q3UA16 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.05■■□□□ 1.12
Spc25Q3UA16 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Spc25Q3UA16 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Spc25Q3UA16 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Spc25Q3UA16 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.04■■□□□ 1.12
Spc25Q3UA16 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.04■■□□□ 1.12
Spc25Q3UA16 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms