Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Nhej1Q3KNJ2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Nhej1Q3KNJ2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
Nhej1Q3KNJ2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Nhej1Q3KNJ2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Nhej1Q3KNJ2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
Nhej1Q3KNJ2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Nhej1Q3KNJ2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Nhej1Q3KNJ2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Nhej1Q3KNJ2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Nhej1Q3KNJ2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Nhej1Q3KNJ2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.36■■□□□ 1.81
Nhej1Q3KNJ2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Nhej1Q3KNJ2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC26.34■■□□□ 1.81
Nhej1Q3KNJ2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.34■■□□□ 1.81
Nhej1Q3KNJ2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Nhej1Q3KNJ2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Nhej1Q3KNJ2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Nhej1Q3KNJ2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Nhej1Q3KNJ2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Nhej1Q3KNJ2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Nhej1Q3KNJ2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Nhej1Q3KNJ2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Nhej1Q3KNJ2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Nhej1Q3KNJ2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Nhej1Q3KNJ2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.28■■□□□ 1.8
Nhej1Q3KNJ2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.27■■□□□ 1.8
Nhej1Q3KNJ2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.26■■□□□ 1.79
Nhej1Q3KNJ2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Nhej1Q3KNJ2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Nhej1Q3KNJ2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Nhej1Q3KNJ2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Nhej1Q3KNJ2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Nhej1Q3KNJ2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Nhej1Q3KNJ2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nhej1Q3KNJ2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nhej1Q3KNJ2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Nhej1Q3KNJ2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Nhej1Q3KNJ2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.17■■□□□ 1.78
Nhej1Q3KNJ2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Nhej1Q3KNJ2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Nhej1Q3KNJ2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.16■■□□□ 1.78
Nhej1Q3KNJ2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Nhej1Q3KNJ2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Nhej1Q3KNJ2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Nhej1Q3KNJ2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Nhej1Q3KNJ2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Nhej1Q3KNJ2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Nhej1Q3KNJ2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
Nhej1Q3KNJ2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Nhej1Q3KNJ2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Nhej1Q3KNJ2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Nhej1Q3KNJ2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Nhej1Q3KNJ2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Nhej1Q3KNJ2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
Nhej1Q3KNJ2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Nhej1Q3KNJ2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
Nhej1Q3KNJ2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Nhej1Q3KNJ2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
Nhej1Q3KNJ2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
Nhej1Q3KNJ2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Nhej1Q3KNJ2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Nhej1Q3KNJ2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Nhej1Q3KNJ2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Nhej1Q3KNJ2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Nhej1Q3KNJ2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Nhej1Q3KNJ2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Nhej1Q3KNJ2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Nhej1Q3KNJ2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Nhej1Q3KNJ2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Nhej1Q3KNJ2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Nhej1Q3KNJ2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Nhej1Q3KNJ2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Nhej1Q3KNJ2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Nhej1Q3KNJ2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Nhej1Q3KNJ2 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Nhej1Q3KNJ2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Nhej1Q3KNJ2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
Nhej1Q3KNJ2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Nhej1Q3KNJ2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Nhej1Q3KNJ2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Nhej1Q3KNJ2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
Nhej1Q3KNJ2 Gm24804-201ENSMUST00000174982 85 ntBASIC25.98■■□□□ 1.75
Nhej1Q3KNJ2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Nhej1Q3KNJ2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Nhej1Q3KNJ2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Nhej1Q3KNJ2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Nhej1Q3KNJ2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Nhej1Q3KNJ2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Nhej1Q3KNJ2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Nhej1Q3KNJ2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Nhej1Q3KNJ2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC25.94■■□□□ 1.74
Nhej1Q3KNJ2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Nhej1Q3KNJ2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
Nhej1Q3KNJ2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Nhej1Q3KNJ2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Nhej1Q3KNJ2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
Nhej1Q3KNJ2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Nhej1Q3KNJ2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Nhej1Q3KNJ2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25.9■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms