Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Npas1P97459 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.43■□□□□ 0.86
Npas1P97459 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Npas1P97459 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Npas1P97459 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.43■□□□□ 0.86
Npas1P97459 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Npas1P97459 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Npas1P97459 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Npas1P97459 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Npas1P97459 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Npas1P97459 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.42■□□□□ 0.86
Npas1P97459 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.41■□□□□ 0.86
Npas1P97459 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Npas1P97459 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Npas1P97459 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Npas1P97459 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.37■□□□□ 0.85
Npas1P97459 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Npas1P97459 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Npas1P97459 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Npas1P97459 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Npas1P97459 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Npas1P97459 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Npas1P97459 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Npas1P97459 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Npas1P97459 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Npas1P97459 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Npas1P97459 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.35■□□□□ 0.85
Npas1P97459 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Npas1P97459 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Npas1P97459 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Npas1P97459 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Npas1P97459 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Npas1P97459 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Npas1P97459 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Npas1P97459 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Npas1P97459 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Npas1P97459 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Npas1P97459 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Npas1P97459 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Npas1P97459 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.31■□□□□ 0.84
Npas1P97459 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.31■□□□□ 0.84
Npas1P97459 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.31■□□□□ 0.84
Npas1P97459 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Npas1P97459 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Npas1P97459 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Npas1P97459 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Npas1P97459 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Npas1P97459 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Npas1P97459 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Npas1P97459 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Npas1P97459 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.28■□□□□ 0.84
Npas1P97459 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Npas1P97459 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Npas1P97459 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Npas1P97459 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Npas1P97459 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Npas1P97459 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Npas1P97459 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.26■□□□□ 0.83
Npas1P97459 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Npas1P97459 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.24■□□□□ 0.83
Npas1P97459 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Npas1P97459 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Npas1P97459 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Npas1P97459 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Npas1P97459 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Npas1P97459 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Npas1P97459 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Npas1P97459 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Npas1P97459 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Npas1P97459 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Npas1P97459 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Npas1P97459 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.22■□□□□ 0.83
Npas1P97459 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
Npas1P97459 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Npas1P97459 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Npas1P97459 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Npas1P97459 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.21■□□□□ 0.83
Npas1P97459 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Npas1P97459 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Npas1P97459 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Npas1P97459 Gm27322-201ENSMUST00000184007 104 ntBASIC20.2■□□□□ 0.82
Npas1P97459 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
Npas1P97459 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Npas1P97459 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Npas1P97459 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Npas1P97459 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Npas1P97459 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Npas1P97459 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.17■□□□□ 0.82
Npas1P97459 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Npas1P97459 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Npas1P97459 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Npas1P97459 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Npas1P97459 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Npas1P97459 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.15■□□□□ 0.82
Npas1P97459 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Npas1P97459 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Npas1P97459 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Npas1P97459 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Npas1P97459 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Npas1P97459 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms