Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.56■□□□□ 0.4
Ube2d3P61079 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube2d3P61079 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ube2d3P61079 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ube2d3P61079 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.55■□□□□ 0.4
Ube2d3P61079 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ube2d3P61079 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ube2d3P61079 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube2d3P61079 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube2d3P61079 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube2d3P61079 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube2d3P61079 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube2d3P61079 Fezf2-202ENSMUST00000224023 1917 ntBASIC17.54■□□□□ 0.4
Ube2d3P61079 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube2d3P61079 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ube2d3P61079 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube2d3P61079 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Ube2d3P61079 Amer2-203ENSMUST00000225247 2662 ntBASIC17.52■□□□□ 0.4
Ube2d3P61079 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ube2d3P61079 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube2d3P61079 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.51■□□□□ 0.39
Ube2d3P61079 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ube2d3P61079 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube2d3P61079 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.5■□□□□ 0.39
Ube2d3P61079 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube2d3P61079 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.48■□□□□ 0.39
Ube2d3P61079 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.48■□□□□ 0.39
Ube2d3P61079 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ube2d3P61079 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube2d3P61079 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube2d3P61079 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube2d3P61079 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ube2d3P61079 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.46■□□□□ 0.39
Ube2d3P61079 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube2d3P61079 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube2d3P61079 Gm24804-201ENSMUST00000174982 85 ntBASIC17.45■□□□□ 0.38
Ube2d3P61079 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ube2d3P61079 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube2d3P61079 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ube2d3P61079 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ube2d3P61079 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ube2d3P61079 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.43■□□□□ 0.38
Ube2d3P61079 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ube2d3P61079 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube2d3P61079 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube2d3P61079 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ube2d3P61079 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ube2d3P61079 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ube2d3P61079 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.4■□□□□ 0.38
Ube2d3P61079 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ube2d3P61079 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ube2d3P61079 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ube2d3P61079 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ube2d3P61079 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ube2d3P61079 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ube2d3P61079 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.38■□□□□ 0.37
Ube2d3P61079 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ube2d3P61079 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ube2d3P61079 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Ube2d3P61079 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ube2d3P61079 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ube2d3P61079 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ube2d3P61079 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ube2d3P61079 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ube2d3P61079 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ube2d3P61079 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube2d3P61079 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube2d3P61079 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube2d3P61079 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube2d3P61079 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube2d3P61079 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube2d3P61079 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ube2d3P61079 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube2d3P61079 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ube2d3P61079 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ube2d3P61079 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ube2d3P61079 Gm16148-201ENSMUST00000119653 893 ntBASIC17.32■□□□□ 0.36
Ube2d3P61079 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube2d3P61079 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Ube2d3P61079 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube2d3P61079 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ube2d3P61079 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC17.31■□□□□ 0.36
Ube2d3P61079 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ube2d3P61079 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ube2d3P61079 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.3■□□□□ 0.36
Ube2d3P61079 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC17.3■□□□□ 0.36
Ube2d3P61079 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube2d3P61079 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ube2d3P61079 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ube2d3P61079 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube2d3P61079 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ube2d3P61079 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ube2d3P61079 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ube2d3P61079 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ube2d3P61079 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube2d3P61079 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.26■□□□□ 0.35
Ube2d3P61079 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ube2d3P61079 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube2d3P61079 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ube2d3P61079 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 9.4 ms