Protein–RNA interactions for Protein: P09022

Hoxa1, Homeobox protein Hox-A1, mousemouse

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa1P09022 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxa1P09022 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
Hoxa1P09022 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
Hoxa1P09022 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxa1P09022 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.96■□□□□ 0.79
Hoxa1P09022 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.96■□□□□ 0.79
Hoxa1P09022 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Hoxa1P09022 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.95■□□□□ 0.78
Hoxa1P09022 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Hoxa1P09022 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.95■□□□□ 0.78
Hoxa1P09022 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxa1P09022 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxa1P09022 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Hoxa1P09022 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxa1P09022 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.91■□□□□ 0.78
Hoxa1P09022 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxa1P09022 Amer2-203ENSMUST00000225247 2662 ntBASIC19.9■□□□□ 0.78
Hoxa1P09022 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxa1P09022 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxa1P09022 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxa1P09022 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxa1P09022 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxa1P09022 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxa1P09022 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Hoxa1P09022 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxa1P09022 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxa1P09022 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxa1P09022 Gm16148-201ENSMUST00000119653 893 ntBASIC19.86■□□□□ 0.77
Hoxa1P09022 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxa1P09022 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxa1P09022 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxa1P09022 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Hoxa1P09022 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxa1P09022 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxa1P09022 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Hoxa1P09022 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hoxa1P09022 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Hoxa1P09022 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hoxa1P09022 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Hoxa1P09022 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxa1P09022 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.82■□□□□ 0.76
Hoxa1P09022 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxa1P09022 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxa1P09022 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxa1P09022 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxa1P09022 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxa1P09022 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxa1P09022 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Hoxa1P09022 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxa1P09022 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxa1P09022 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxa1P09022 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxa1P09022 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxa1P09022 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.77■□□□□ 0.76
Hoxa1P09022 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Hoxa1P09022 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.77■□□□□ 0.76
Hoxa1P09022 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Hoxa1P09022 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxa1P09022 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.76■□□□□ 0.75
Hoxa1P09022 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxa1P09022 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxa1P09022 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxa1P09022 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.75■□□□□ 0.75
Hoxa1P09022 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.74■□□□□ 0.75
Hoxa1P09022 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxa1P09022 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Hoxa1P09022 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxa1P09022 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Hoxa1P09022 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxa1P09022 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxa1P09022 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxa1P09022 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxa1P09022 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxa1P09022 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Hoxa1P09022 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxa1P09022 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxa1P09022 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxa1P09022 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Hoxa1P09022 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.7■□□□□ 0.74
Hoxa1P09022 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxa1P09022 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxa1P09022 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxa1P09022 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxa1P09022 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxa1P09022 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxa1P09022 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.67■□□□□ 0.74
Hoxa1P09022 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxa1P09022 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Hoxa1P09022 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa1P09022 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa1P09022 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.66■□□□□ 0.74
Hoxa1P09022 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Hoxa1P09022 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxa1P09022 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxa1P09022 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxa1P09022 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.63■□□□□ 0.73
Hoxa1P09022 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxa1P09022 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.63■□□□□ 0.73
Hoxa1P09022 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Hoxa1P09022 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms