Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
P06323 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
P06323 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
P06323 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
P06323 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
P06323 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
P06323 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
P06323 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
P06323 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
P06323 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
P06323 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
P06323 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
P06323 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
P06323 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
P06323 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
P06323 Gm24804-201ENSMUST00000174982 85 ntBASIC19.78■□□□□ 0.76
P06323 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.75■□□□□ 0.75
P06323 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.75■□□□□ 0.75
P06323 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
P06323 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.74■□□□□ 0.75
P06323 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
P06323 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
P06323 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.74■□□□□ 0.75
P06323 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
P06323 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.74■□□□□ 0.75
P06323 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
P06323 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
P06323 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
P06323 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
P06323 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
P06323 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.71■□□□□ 0.75
P06323 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
P06323 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
P06323 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
P06323 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
P06323 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
P06323 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
P06323 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
P06323 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
P06323 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
P06323 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
P06323 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.67■□□□□ 0.74
P06323 Gm16148-201ENSMUST00000119653 893 ntBASIC19.67■□□□□ 0.74
P06323 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
P06323 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
P06323 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
P06323 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
P06323 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
P06323 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
P06323 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
P06323 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
P06323 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
P06323 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
P06323 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
P06323 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
P06323 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
P06323 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
P06323 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
P06323 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
P06323 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
P06323 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
P06323 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
P06323 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
P06323 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
P06323 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
P06323 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
P06323 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
P06323 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
P06323 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
P06323 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
P06323 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
P06323 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
P06323 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.56■□□□□ 0.72
P06323 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
P06323 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.56■□□□□ 0.72
P06323 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
P06323 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.55■□□□□ 0.72
P06323 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
P06323 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
P06323 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.54■□□□□ 0.72
P06323 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
P06323 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
P06323 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
P06323 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
P06323 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
P06323 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.52■□□□□ 0.71
P06323 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P06323 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
P06323 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
P06323 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P06323 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P06323 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P06323 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
P06323 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
P06323 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P06323 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
P06323 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P06323 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
P06323 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P06323 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 517.4 ms