Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.29■□□□□ 0.36
Sh2d1aO88890 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d1aO88890 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Sh2d1aO88890 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh2d1aO88890 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sh2d1aO88890 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sh2d1aO88890 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh2d1aO88890 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Sh2d1aO88890 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
Sh2d1aO88890 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Sh2d1aO88890 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sh2d1aO88890 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sh2d1aO88890 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh2d1aO88890 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh2d1aO88890 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh2d1aO88890 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Sh2d1aO88890 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2d1aO88890 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2d1aO88890 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2d1aO88890 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2d1aO88890 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Sh2d1aO88890 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2d1aO88890 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2d1aO88890 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh2d1aO88890 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sh2d1aO88890 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sh2d1aO88890 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sh2d1aO88890 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sh2d1aO88890 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sh2d1aO88890 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d1aO88890 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d1aO88890 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d1aO88890 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d1aO88890 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d1aO88890 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Sh2d1aO88890 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d1aO88890 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Sh2d1aO88890 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh2d1aO88890 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh2d1aO88890 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sh2d1aO88890 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh2d1aO88890 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sh2d1aO88890 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh2d1aO88890 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sh2d1aO88890 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh2d1aO88890 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2d1aO88890 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2d1aO88890 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.14■□□□□ 0.34
Sh2d1aO88890 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2d1aO88890 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.14■□□□□ 0.33
Sh2d1aO88890 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2d1aO88890 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2d1aO88890 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2d1aO88890 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2d1aO88890 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Sh2d1aO88890 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2d1aO88890 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2d1aO88890 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sh2d1aO88890 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC17.12■□□□□ 0.33
Sh2d1aO88890 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d1aO88890 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d1aO88890 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.12■□□□□ 0.33
Sh2d1aO88890 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d1aO88890 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Sh2d1aO88890 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sh2d1aO88890 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d1aO88890 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d1aO88890 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.11■□□□□ 0.33
Sh2d1aO88890 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d1aO88890 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d1aO88890 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Sh2d1aO88890 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d1aO88890 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2d1aO88890 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sh2d1aO88890 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Sh2d1aO88890 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh2d1aO88890 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sh2d1aO88890 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sh2d1aO88890 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh2d1aO88890 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh2d1aO88890 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sh2d1aO88890 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sh2d1aO88890 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh2d1aO88890 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh2d1aO88890 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh2d1aO88890 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.04■□□□□ 0.32
Sh2d1aO88890 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sh2d1aO88890 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC17.04■□□□□ 0.32
Sh2d1aO88890 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh2d1aO88890 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh2d1aO88890 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sh2d1aO88890 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Sh2d1aO88890 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh2d1aO88890 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh2d1aO88890 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sh2d1aO88890 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17■□□□□ 0.31
Sh2d1aO88890 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17■□□□□ 0.31
Sh2d1aO88890 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh2d1aO88890 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh2d1aO88890 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms