Protein–RNA interactions for Protein: O88346

Tnnt1, Troponin T, slow skeletal muscle, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnnt1O88346 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Tnnt1O88346 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Tnnt1O88346 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
Tnnt1O88346 Gm9939-201ENSMUST00000067161 1154 ntBASIC31.99■■■□□ 2.71
Tnnt1O88346 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
Tnnt1O88346 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC31.98■■■□□ 2.71
Tnnt1O88346 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC31.98■■■□□ 2.71
Tnnt1O88346 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Tnnt1O88346 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Tnnt1O88346 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Tnnt1O88346 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Tnnt1O88346 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Tnnt1O88346 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
Tnnt1O88346 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Tnnt1O88346 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Tnnt1O88346 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Tnnt1O88346 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Tnnt1O88346 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Tnnt1O88346 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
Tnnt1O88346 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
Tnnt1O88346 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Tnnt1O88346 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Tnnt1O88346 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC31.87■■■□□ 2.69
Tnnt1O88346 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC31.87■■■□□ 2.69
Tnnt1O88346 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Tnnt1O88346 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Tnnt1O88346 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Tnnt1O88346 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC31.84■■■□□ 2.69
Tnnt1O88346 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Tnnt1O88346 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
Tnnt1O88346 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
Tnnt1O88346 Gm6821-201ENSMUST00000107540 542 ntBASIC31.81■■■□□ 2.68
Tnnt1O88346 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC31.8■■■□□ 2.68
Tnnt1O88346 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
Tnnt1O88346 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Tnnt1O88346 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Tnnt1O88346 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Tnnt1O88346 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Tnnt1O88346 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Tnnt1O88346 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
Tnnt1O88346 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Tnnt1O88346 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
Tnnt1O88346 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Tnnt1O88346 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Tnnt1O88346 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Tnnt1O88346 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
Tnnt1O88346 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC31.75■■■□□ 2.67
Tnnt1O88346 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Tnnt1O88346 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Tnnt1O88346 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Tnnt1O88346 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Tnnt1O88346 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Tnnt1O88346 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Tnnt1O88346 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Tnnt1O88346 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
Tnnt1O88346 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
Tnnt1O88346 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
Tnnt1O88346 Gm8503-201ENSMUST00000118131 455 ntBASIC31.69■■■□□ 2.66
Tnnt1O88346 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC31.68■■■□□ 2.66
Tnnt1O88346 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Tnnt1O88346 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Tnnt1O88346 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC31.66■■■□□ 2.66
Tnnt1O88346 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Tnnt1O88346 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Tnnt1O88346 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Tnnt1O88346 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC31.61■■■□□ 2.65
Tnnt1O88346 Gm42809-201ENSMUST00000198429 1138 ntBASIC31.61■■■□□ 2.65
Tnnt1O88346 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Tnnt1O88346 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
Tnnt1O88346 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC31.59■■■□□ 2.65
Tnnt1O88346 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Tnnt1O88346 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Tnnt1O88346 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Tnnt1O88346 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Tnnt1O88346 Gm6345-201ENSMUST00000180378 1691 ntBASIC31.54■■■□□ 2.64
Tnnt1O88346 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Tnnt1O88346 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC31.54■■■□□ 2.64
Tnnt1O88346 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Tnnt1O88346 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Tnnt1O88346 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Tnnt1O88346 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC31.52■■■□□ 2.64
Tnnt1O88346 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Tnnt1O88346 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.64
Tnnt1O88346 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Tnnt1O88346 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Tnnt1O88346 Nkain2-201ENSMUST00000092602 558 ntBASIC31.49■■■□□ 2.63
Tnnt1O88346 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
Tnnt1O88346 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Tnnt1O88346 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
Tnnt1O88346 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.47■■■□□ 2.63
Tnnt1O88346 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC31.45■■■□□ 2.63
Tnnt1O88346 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Tnnt1O88346 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Tnnt1O88346 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Tnnt1O88346 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Tnnt1O88346 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Tnnt1O88346 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Tnnt1O88346 Gm5987-201ENSMUST00000196433 1151 ntBASIC31.41■■■□□ 2.62
Tnnt1O88346 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC31.41■■■□□ 2.62
Tnnt1O88346 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC31.41■■■□□ 2.62
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms