Protein–RNA interactions for Protein: O54798

Brs3, Bombesin receptor subtype-3, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brs3O54798 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Brs3O54798 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Brs3O54798 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Brs3O54798 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Brs3O54798 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Brs3O54798 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Brs3O54798 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Brs3O54798 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Brs3O54798 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Brs3O54798 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Brs3O54798 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Brs3O54798 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Brs3O54798 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Brs3O54798 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.23■□□□□ 0.83
Brs3O54798 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.23■□□□□ 0.83
Brs3O54798 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.23■□□□□ 0.83
Brs3O54798 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Brs3O54798 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.23■□□□□ 0.83
Brs3O54798 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.22■□□□□ 0.83
Brs3O54798 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Brs3O54798 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Brs3O54798 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Brs3O54798 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Brs3O54798 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Brs3O54798 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Brs3O54798 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Brs3O54798 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Brs3O54798 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Brs3O54798 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Brs3O54798 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Brs3O54798 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Brs3O54798 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Brs3O54798 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Brs3O54798 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Brs3O54798 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.16■□□□□ 0.82
Brs3O54798 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Brs3O54798 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Brs3O54798 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Brs3O54798 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Brs3O54798 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Brs3O54798 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Brs3O54798 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Brs3O54798 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Brs3O54798 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Brs3O54798 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Brs3O54798 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.12■□□□□ 0.81
Brs3O54798 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Brs3O54798 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Brs3O54798 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Brs3O54798 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.11■□□□□ 0.81
Brs3O54798 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Brs3O54798 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.07■□□□□ 0.8
Brs3O54798 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.07■□□□□ 0.8
Brs3O54798 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Brs3O54798 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Brs3O54798 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Brs3O54798 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Brs3O54798 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Brs3O54798 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Brs3O54798 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Brs3O54798 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Brs3O54798 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.05■□□□□ 0.8
Brs3O54798 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Brs3O54798 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Brs3O54798 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Brs3O54798 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Brs3O54798 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Brs3O54798 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Brs3O54798 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Brs3O54798 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.02■□□□□ 0.79
Brs3O54798 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Brs3O54798 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Brs3O54798 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20■□□□□ 0.79
Brs3O54798 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Brs3O54798 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brs3O54798 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brs3O54798 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brs3O54798 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.99■□□□□ 0.79
Brs3O54798 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Brs3O54798 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brs3O54798 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Brs3O54798 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Brs3O54798 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Brs3O54798 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.97■□□□□ 0.79
Brs3O54798 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Brs3O54798 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Brs3O54798 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Brs3O54798 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Brs3O54798 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Brs3O54798 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brs3O54798 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Brs3O54798 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.93■□□□□ 0.78
Brs3O54798 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brs3O54798 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Brs3O54798 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brs3O54798 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brs3O54798 Gm6821-201ENSMUST00000107540 542 ntBASIC19.91■□□□□ 0.78
Brs3O54798 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brs3O54798 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Brs3O54798 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms