Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Atf6bO35451 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.22■□□□□ 0.99
Atf6bO35451 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Atf6bO35451 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Atf6bO35451 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atf6bO35451 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atf6bO35451 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atf6bO35451 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atf6bO35451 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Atf6bO35451 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.19■□□□□ 0.98
Atf6bO35451 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atf6bO35451 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Atf6bO35451 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atf6bO35451 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Atf6bO35451 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atf6bO35451 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atf6bO35451 Gm24970-201ENSMUST00000175582 82 ntBASIC21.17■□□□□ 0.98
Atf6bO35451 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.17■□□□□ 0.98
Atf6bO35451 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.17■□□□□ 0.98
Atf6bO35451 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atf6bO35451 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atf6bO35451 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.16■□□□□ 0.98
Atf6bO35451 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Atf6bO35451 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Atf6bO35451 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atf6bO35451 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atf6bO35451 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atf6bO35451 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atf6bO35451 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Atf6bO35451 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atf6bO35451 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.12■□□□□ 0.97
Atf6bO35451 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atf6bO35451 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atf6bO35451 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atf6bO35451 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Atf6bO35451 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atf6bO35451 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Atf6bO35451 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.11■□□□□ 0.97
Atf6bO35451 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.11■□□□□ 0.97
Atf6bO35451 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
Atf6bO35451 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Atf6bO35451 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atf6bO35451 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atf6bO35451 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atf6bO35451 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atf6bO35451 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.08■□□□□ 0.96
Atf6bO35451 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Atf6bO35451 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atf6bO35451 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Atf6bO35451 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atf6bO35451 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atf6bO35451 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atf6bO35451 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Atf6bO35451 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Atf6bO35451 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.05■□□□□ 0.96
Atf6bO35451 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Atf6bO35451 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Atf6bO35451 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Atf6bO35451 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Atf6bO35451 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.03■□□□□ 0.96
Atf6bO35451 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.03■□□□□ 0.96
Atf6bO35451 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atf6bO35451 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Atf6bO35451 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Atf6bO35451 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.01■□□□□ 0.95
Atf6bO35451 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Atf6bO35451 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21■□□□□ 0.95
Atf6bO35451 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Atf6bO35451 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Atf6bO35451 AC157572.2-201ENSMUST00000226970 908 ntBASIC21■□□□□ 0.95
Atf6bO35451 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Atf6bO35451 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atf6bO35451 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Atf6bO35451 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atf6bO35451 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atf6bO35451 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Atf6bO35451 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atf6bO35451 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atf6bO35451 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atf6bO35451 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Atf6bO35451 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Atf6bO35451 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atf6bO35451 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atf6bO35451 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Atf6bO35451 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atf6bO35451 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Atf6bO35451 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atf6bO35451 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atf6bO35451 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atf6bO35451 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atf6bO35451 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atf6bO35451 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atf6bO35451 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atf6bO35451 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.91■□□□□ 0.94
Atf6bO35451 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atf6bO35451 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Atf6bO35451 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atf6bO35451 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Atf6bO35451 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atf6bO35451 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms