Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pkd1O08852 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pkd1O08852 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC16.51■□□□□ 0.23
Pkd1O08852 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pkd1O08852 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pkd1O08852 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pkd1O08852 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
Pkd1O08852 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pkd1O08852 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pkd1O08852 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pkd1O08852 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pkd1O08852 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pkd1O08852 Gm30346-201ENSMUST00000218641 1699 ntBASIC16.47■□□□□ 0.23
Pkd1O08852 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pkd1O08852 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Pkd1O08852 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pkd1O08852 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pkd1O08852 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pkd1O08852 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pkd1O08852 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pkd1O08852 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pkd1O08852 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pkd1O08852 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pkd1O08852 Cap2-205ENSMUST00000225824 1634 ntBASIC16.44■□□□□ 0.22
Pkd1O08852 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pkd1O08852 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pkd1O08852 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC16.43■□□□□ 0.22
Pkd1O08852 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pkd1O08852 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pkd1O08852 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pkd1O08852 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pkd1O08852 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pkd1O08852 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pkd1O08852 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pkd1O08852 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.4■□□□□ 0.22
Pkd1O08852 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.4■□□□□ 0.22
Pkd1O08852 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pkd1O08852 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pkd1O08852 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pkd1O08852 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
Pkd1O08852 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pkd1O08852 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pkd1O08852 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pkd1O08852 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC16.35■□□□□ 0.21
Pkd1O08852 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.35■□□□□ 0.21
Pkd1O08852 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pkd1O08852 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Pkd1O08852 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.35■□□□□ 0.21
Pkd1O08852 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pkd1O08852 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.34■□□□□ 0.21
Pkd1O08852 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC16.34■□□□□ 0.21
Pkd1O08852 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pkd1O08852 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pkd1O08852 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC16.33■□□□□ 0.21
Pkd1O08852 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pkd1O08852 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pkd1O08852 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pkd1O08852 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pkd1O08852 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC16.32■□□□□ 0.2
Pkd1O08852 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Pkd1O08852 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC16.32■□□□□ 0.2
Pkd1O08852 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Pkd1O08852 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pkd1O08852 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pkd1O08852 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Pkd1O08852 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pkd1O08852 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pkd1O08852 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pkd1O08852 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pkd1O08852 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pkd1O08852 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pkd1O08852 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pkd1O08852 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pkd1O08852 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pkd1O08852 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pkd1O08852 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC16.27■□□□□ 0.2
Pkd1O08852 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pkd1O08852 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.27■□□□□ 0.2
Pkd1O08852 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Pkd1O08852 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pkd1O08852 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pkd1O08852 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Pkd1O08852 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pkd1O08852 Gm15039-201ENSMUST00000118914 875 ntBASIC16.25■□□□□ 0.19
Pkd1O08852 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Pkd1O08852 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pkd1O08852 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pkd1O08852 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pkd1O08852 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pkd1O08852 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pkd1O08852 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC16.23■□□□□ 0.19
Pkd1O08852 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Pkd1O08852 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC16.22■□□□□ 0.19
Pkd1O08852 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.22■□□□□ 0.19
Pkd1O08852 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Pkd1O08852 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pkd1O08852 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.2■□□□□ 0.18
Pkd1O08852 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Pkd1O08852 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pkd1O08852 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms