Protein–RNA interactions for Protein: O08843

Lst1, Leukocyte-specific transcript 1 protein, mousemouse

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lst1O08843 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Lst1O08843 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC16.56■□□□□ 0.24
Lst1O08843 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lst1O08843 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lst1O08843 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lst1O08843 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lst1O08843 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lst1O08843 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lst1O08843 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lst1O08843 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lst1O08843 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lst1O08843 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Lst1O08843 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lst1O08843 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lst1O08843 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lst1O08843 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lst1O08843 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lst1O08843 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Lst1O08843 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lst1O08843 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lst1O08843 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Lst1O08843 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Lst1O08843 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Lst1O08843 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lst1O08843 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lst1O08843 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lst1O08843 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC16.51■□□□□ 0.23
Lst1O08843 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Lst1O08843 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lst1O08843 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lst1O08843 Gm25238-201ENSMUST00000174914 89 ntBASIC16.49■□□□□ 0.23
Lst1O08843 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lst1O08843 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lst1O08843 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lst1O08843 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lst1O08843 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lst1O08843 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lst1O08843 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lst1O08843 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC16.47■□□□□ 0.23
Lst1O08843 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lst1O08843 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Lst1O08843 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lst1O08843 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lst1O08843 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC16.45■□□□□ 0.22
Lst1O08843 AL845457.1-201ENSMUST00000197244 68 ntBASIC16.44■□□□□ 0.22
Lst1O08843 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lst1O08843 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lst1O08843 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lst1O08843 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
Lst1O08843 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lst1O08843 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lst1O08843 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lst1O08843 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lst1O08843 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Lst1O08843 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lst1O08843 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lst1O08843 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lst1O08843 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lst1O08843 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lst1O08843 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lst1O08843 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Lst1O08843 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lst1O08843 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lst1O08843 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Lst1O08843 Rab21-202ENSMUST00000218831 843 ntBASIC16.37■□□□□ 0.21
Lst1O08843 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Lst1O08843 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lst1O08843 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lst1O08843 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lst1O08843 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lst1O08843 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Lst1O08843 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lst1O08843 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lst1O08843 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lst1O08843 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lst1O08843 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lst1O08843 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Lst1O08843 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lst1O08843 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lst1O08843 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lst1O08843 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Lst1O08843 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lst1O08843 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lst1O08843 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.32■□□□□ 0.2
Lst1O08843 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Lst1O08843 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lst1O08843 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lst1O08843 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Lst1O08843 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lst1O08843 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Lst1O08843 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lst1O08843 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lst1O08843 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lst1O08843 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Lst1O08843 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
Lst1O08843 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lst1O08843 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lst1O08843 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lst1O08843 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Lst1O08843 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms