Protein–RNA interactions for Protein: H3BJZ2

Cdhr4, Cadherin-related family member 4, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr4H3BJZ2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Cdhr4H3BJZ2 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.88■■□□□ 1.09
Cdhr4H3BJZ2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cdhr4H3BJZ2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdhr4H3BJZ2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdhr4H3BJZ2 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.87■■□□□ 1.09
Cdhr4H3BJZ2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.86■■□□□ 1.09
Cdhr4H3BJZ2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cdhr4H3BJZ2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cdhr4H3BJZ2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cdhr4H3BJZ2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cdhr4H3BJZ2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cdhr4H3BJZ2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Cdhr4H3BJZ2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdhr4H3BJZ2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.82■■□□□ 1.08
Cdhr4H3BJZ2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdhr4H3BJZ2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdhr4H3BJZ2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdhr4H3BJZ2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cdhr4H3BJZ2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.8■■□□□ 1.08
Cdhr4H3BJZ2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cdhr4H3BJZ2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cdhr4H3BJZ2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Cdhr4H3BJZ2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdhr4H3BJZ2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdhr4H3BJZ2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cdhr4H3BJZ2 Gm6821-201ENSMUST00000107540 542 ntBASIC21.77■■□□□ 1.08
Cdhr4H3BJZ2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cdhr4H3BJZ2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cdhr4H3BJZ2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cdhr4H3BJZ2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cdhr4H3BJZ2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
Cdhr4H3BJZ2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdhr4H3BJZ2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.75■■□□□ 1.07
Cdhr4H3BJZ2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Cdhr4H3BJZ2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdhr4H3BJZ2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Cdhr4H3BJZ2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdhr4H3BJZ2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdhr4H3BJZ2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdhr4H3BJZ2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.73■■□□□ 1.07
Cdhr4H3BJZ2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdhr4H3BJZ2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.72■■□□□ 1.07
Cdhr4H3BJZ2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Cdhr4H3BJZ2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdhr4H3BJZ2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdhr4H3BJZ2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cdhr4H3BJZ2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.71■■□□□ 1.07
Cdhr4H3BJZ2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdhr4H3BJZ2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdhr4H3BJZ2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cdhr4H3BJZ2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdhr4H3BJZ2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.67■■□□□ 1.06
Cdhr4H3BJZ2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Cdhr4H3BJZ2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cdhr4H3BJZ2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Cdhr4H3BJZ2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdhr4H3BJZ2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cdhr4H3BJZ2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdhr4H3BJZ2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cdhr4H3BJZ2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cdhr4H3BJZ2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cdhr4H3BJZ2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdhr4H3BJZ2 Gm8503-201ENSMUST00000118131 455 ntBASIC21.64■■□□□ 1.05
Cdhr4H3BJZ2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdhr4H3BJZ2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdhr4H3BJZ2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.63■■□□□ 1.05
Cdhr4H3BJZ2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdhr4H3BJZ2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdhr4H3BJZ2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdhr4H3BJZ2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdhr4H3BJZ2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Cdhr4H3BJZ2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdhr4H3BJZ2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdhr4H3BJZ2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdhr4H3BJZ2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.61■■□□□ 1.05
Cdhr4H3BJZ2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cdhr4H3BJZ2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdhr4H3BJZ2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdhr4H3BJZ2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdhr4H3BJZ2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cdhr4H3BJZ2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdhr4H3BJZ2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdhr4H3BJZ2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdhr4H3BJZ2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdhr4H3BJZ2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdhr4H3BJZ2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdhr4H3BJZ2 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.55■■□□□ 1.04
Cdhr4H3BJZ2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdhr4H3BJZ2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Cdhr4H3BJZ2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Cdhr4H3BJZ2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cdhr4H3BJZ2 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.53■■□□□ 1.04
Cdhr4H3BJZ2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdhr4H3BJZ2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdhr4H3BJZ2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cdhr4H3BJZ2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Cdhr4H3BJZ2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Cdhr4H3BJZ2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cdhr4H3BJZ2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms