Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Col6a5A6H584 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col6a5A6H584 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.72■□□□□ 0.75
Col6a5A6H584 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col6a5A6H584 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col6a5A6H584 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col6a5A6H584 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col6a5A6H584 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.69■□□□□ 0.74
Col6a5A6H584 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col6a5A6H584 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a5A6H584 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col6a5A6H584 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.67■□□□□ 0.74
Col6a5A6H584 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.67■□□□□ 0.74
Col6a5A6H584 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col6a5A6H584 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col6a5A6H584 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col6a5A6H584 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col6a5A6H584 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col6a5A6H584 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col6a5A6H584 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col6a5A6H584 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col6a5A6H584 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col6a5A6H584 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.62■□□□□ 0.73
Col6a5A6H584 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
Col6a5A6H584 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col6a5A6H584 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col6a5A6H584 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col6a5A6H584 Gm22567-201ENSMUST00000175542 342 ntBASIC19.61■□□□□ 0.73
Col6a5A6H584 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.6■□□□□ 0.73
Col6a5A6H584 Gm6311-201ENSMUST00000073790 878 ntBASIC19.6■□□□□ 0.73
Col6a5A6H584 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col6a5A6H584 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col6a5A6H584 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col6a5A6H584 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col6a5A6H584 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.58■□□□□ 0.73
Col6a5A6H584 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col6a5A6H584 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col6a5A6H584 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.57■□□□□ 0.72
Col6a5A6H584 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.57■□□□□ 0.72
Col6a5A6H584 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col6a5A6H584 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.56■□□□□ 0.72
Col6a5A6H584 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col6a5A6H584 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
Col6a5A6H584 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.55■□□□□ 0.72
Col6a5A6H584 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col6a5A6H584 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col6a5A6H584 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col6a5A6H584 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.52■□□□□ 0.71
Col6a5A6H584 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Col6a5A6H584 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col6a5A6H584 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Col6a5A6H584 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col6a5A6H584 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col6a5A6H584 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col6a5A6H584 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Col6a5A6H584 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Col6a5A6H584 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.49■□□□□ 0.71
Col6a5A6H584 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Col6a5A6H584 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Col6a5A6H584 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col6a5A6H584 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Col6a5A6H584 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col6a5A6H584 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Col6a5A6H584 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.46■□□□□ 0.71
Col6a5A6H584 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.46■□□□□ 0.71
Col6a5A6H584 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Col6a5A6H584 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col6a5A6H584 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col6a5A6H584 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.45■□□□□ 0.7
Col6a5A6H584 Gm12366-201ENSMUST00000121722 873 ntBASIC19.45■□□□□ 0.7
Col6a5A6H584 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.45■□□□□ 0.7
Col6a5A6H584 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.45■□□□□ 0.7
Col6a5A6H584 Gm5786-201ENSMUST00000085368 882 ntBASIC19.45■□□□□ 0.7
Col6a5A6H584 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Col6a5A6H584 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Col6a5A6H584 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col6a5A6H584 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.41■□□□□ 0.7
Col6a5A6H584 Gm5812-201ENSMUST00000061073 957 ntBASIC19.41■□□□□ 0.7
Col6a5A6H584 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col6a5A6H584 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col6a5A6H584 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Col6a5A6H584 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col6a5A6H584 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col6a5A6H584 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col6a5A6H584 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Col6a5A6H584 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col6a5A6H584 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Col6a5A6H584 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col6a5A6H584 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Col6a5A6H584 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col6a5A6H584 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.36■□□□□ 0.69
Col6a5A6H584 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col6a5A6H584 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col6a5A6H584 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col6a5A6H584 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
Col6a5A6H584 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Col6a5A6H584 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col6a5A6H584 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.35■□□□□ 0.69
Col6a5A6H584 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Col6a5A6H584 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms