Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trav12-1A0N8R1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav12-1A0N8R1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav12-1A0N8R1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav12-1A0N8R1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav12-1A0N8R1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.71■□□□□ 0.91
Trav12-1A0N8R1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.7■□□□□ 0.9
Trav12-1A0N8R1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav12-1A0N8R1 Gm8109-201ENSMUST00000194076 746 ntBASIC20.69■□□□□ 0.9
Trav12-1A0N8R1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.68■□□□□ 0.9
Trav12-1A0N8R1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trav12-1A0N8R1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav12-1A0N8R1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Trav12-1A0N8R1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav12-1A0N8R1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trav12-1A0N8R1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav12-1A0N8R1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav12-1A0N8R1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav12-1A0N8R1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trav12-1A0N8R1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav12-1A0N8R1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trav12-1A0N8R1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.64■□□□□ 0.89
Trav12-1A0N8R1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trav12-1A0N8R1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav12-1A0N8R1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Trav12-1A0N8R1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trav12-1A0N8R1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Trav12-1A0N8R1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav12-1A0N8R1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Trav12-1A0N8R1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trav12-1A0N8R1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trav12-1A0N8R1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Trav12-1A0N8R1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav12-1A0N8R1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav12-1A0N8R1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav12-1A0N8R1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trav12-1A0N8R1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Trav12-1A0N8R1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trav12-1A0N8R1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trav12-1A0N8R1 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Trav12-1A0N8R1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav12-1A0N8R1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav12-1A0N8R1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav12-1A0N8R1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Trav12-1A0N8R1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav12-1A0N8R1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav12-1A0N8R1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trav12-1A0N8R1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Trav12-1A0N8R1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.49■□□□□ 0.87
Trav12-1A0N8R1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav12-1A0N8R1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.47■□□□□ 0.87
Trav12-1A0N8R1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Trav12-1A0N8R1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Trav12-1A0N8R1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav12-1A0N8R1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trav12-1A0N8R1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav12-1A0N8R1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Trav12-1A0N8R1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav12-1A0N8R1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Trav12-1A0N8R1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav12-1A0N8R1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trav12-1A0N8R1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trav12-1A0N8R1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav12-1A0N8R1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav12-1A0N8R1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav12-1A0N8R1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav12-1A0N8R1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Trav12-1A0N8R1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav12-1A0N8R1 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav12-1A0N8R1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav12-1A0N8R1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav12-1A0N8R1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav12-1A0N8R1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Trav12-1A0N8R1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trav12-1A0N8R1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav12-1A0N8R1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trav12-1A0N8R1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav12-1A0N8R1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav12-1A0N8R1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav12-1A0N8R1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav12-1A0N8R1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav12-1A0N8R1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Trav12-1A0N8R1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trav12-1A0N8R1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav12-1A0N8R1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.37■□□□□ 0.85
Trav12-1A0N8R1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trav12-1A0N8R1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav12-1A0N8R1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Trav12-1A0N8R1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav12-1A0N8R1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav12-1A0N8R1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav12-1A0N8R1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trav12-1A0N8R1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav12-1A0N8R1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Trav12-1A0N8R1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav12-1A0N8R1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trav12-1A0N8R1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trav12-1A0N8R1 Gm24804-201ENSMUST00000174982 85 ntBASIC20.33■□□□□ 0.85
Trav12-1A0N8R1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trav12-1A0N8R1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms