Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Gm3880A0A1B0GSB3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC12.41□□□□□ -0.42
Gm3880A0A1B0GSB3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3880A0A1B0GSB3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3880A0A1B0GSB3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3880A0A1B0GSB3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3880A0A1B0GSB3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3880A0A1B0GSB3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3880A0A1B0GSB3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3880A0A1B0GSB3 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm3880A0A1B0GSB3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm3880A0A1B0GSB3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm3880A0A1B0GSB3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC12.38□□□□□ -0.43
Gm3880A0A1B0GSB3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm3880A0A1B0GSB3 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm3880A0A1B0GSB3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm3880A0A1B0GSB3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3880A0A1B0GSB3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3880A0A1B0GSB3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3880A0A1B0GSB3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3880A0A1B0GSB3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm3880A0A1B0GSB3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Gm3880A0A1B0GSB3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3880A0A1B0GSB3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Gm3880A0A1B0GSB3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Gm3880A0A1B0GSB3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm3880A0A1B0GSB3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm3880A0A1B0GSB3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm3880A0A1B0GSB3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm3880A0A1B0GSB3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Gm3880A0A1B0GSB3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3880A0A1B0GSB3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3880A0A1B0GSB3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3880A0A1B0GSB3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3880A0A1B0GSB3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3880A0A1B0GSB3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3880A0A1B0GSB3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm3880A0A1B0GSB3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC12.33□□□□□ -0.44
Gm3880A0A1B0GSB3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm3880A0A1B0GSB3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm3880A0A1B0GSB3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm3880A0A1B0GSB3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Gm3880A0A1B0GSB3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3880A0A1B0GSB3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Gm3880A0A1B0GSB3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3880A0A1B0GSB3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3880A0A1B0GSB3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3880A0A1B0GSB3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3880A0A1B0GSB3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3880A0A1B0GSB3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Gm3880A0A1B0GSB3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3880A0A1B0GSB3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3880A0A1B0GSB3 Fezf2-202ENSMUST00000224023 1917 ntBASIC12.31□□□□□ -0.44
Gm3880A0A1B0GSB3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3880A0A1B0GSB3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3880A0A1B0GSB3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3880A0A1B0GSB3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Gm3880A0A1B0GSB3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Gm3880A0A1B0GSB3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3880A0A1B0GSB3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3880A0A1B0GSB3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Gm3880A0A1B0GSB3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Gm3880A0A1B0GSB3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3880A0A1B0GSB3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3880A0A1B0GSB3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3880A0A1B0GSB3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3880A0A1B0GSB3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gm3880A0A1B0GSB3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gm3880A0A1B0GSB3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gm3880A0A1B0GSB3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Gm3880A0A1B0GSB3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm3880A0A1B0GSB3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Gm3880A0A1B0GSB3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm3880A0A1B0GSB3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Gm3880A0A1B0GSB3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm3880A0A1B0GSB3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Gm3880A0A1B0GSB3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
Gm3880A0A1B0GSB3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Gm3880A0A1B0GSB3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC12.24□□□□□ -0.45
Gm3880A0A1B0GSB3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3880A0A1B0GSB3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3880A0A1B0GSB3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3880A0A1B0GSB3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3880A0A1B0GSB3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3880A0A1B0GSB3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3880A0A1B0GSB3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Gm3880A0A1B0GSB3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3880A0A1B0GSB3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Gm3880A0A1B0GSB3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3880A0A1B0GSB3 Gm15042-201ENSMUST00000120212 883 ntBASIC12.22□□□□□ -0.45
Gm3880A0A1B0GSB3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Gm3880A0A1B0GSB3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3880A0A1B0GSB3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm3880A0A1B0GSB3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm3880A0A1B0GSB3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gm3880A0A1B0GSB3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3880A0A1B0GSB3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Gm3880A0A1B0GSB3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3880A0A1B0GSB3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3880A0A1B0GSB3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 7.8 ms