Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav9d-4A0A0G2JG37 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav9d-4A0A0G2JG37 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav9d-4A0A0G2JG37 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav9d-4A0A0G2JG37 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav9d-4A0A0G2JG37 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav9d-4A0A0G2JG37 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav9d-4A0A0G2JG37 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9d-4A0A0G2JG37 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav9d-4A0A0G2JG37 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav9d-4A0A0G2JG37 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav9d-4A0A0G2JG37 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trav9d-4A0A0G2JG37 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav9d-4A0A0G2JG37 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav9d-4A0A0G2JG37 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav9d-4A0A0G2JG37 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC16.72■□□□□ 0.27
Trav9d-4A0A0G2JG37 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trav9d-4A0A0G2JG37 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav9d-4A0A0G2JG37 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav9d-4A0A0G2JG37 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav9d-4A0A0G2JG37 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trav9d-4A0A0G2JG37 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9d-4A0A0G2JG37 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9d-4A0A0G2JG37 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9d-4A0A0G2JG37 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9d-4A0A0G2JG37 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9d-4A0A0G2JG37 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9d-4A0A0G2JG37 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9d-4A0A0G2JG37 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav9d-4A0A0G2JG37 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav9d-4A0A0G2JG37 AC153890.1-201ENSMUST00000220021 2469 ntBASIC16.69■□□□□ 0.26
Trav9d-4A0A0G2JG37 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav9d-4A0A0G2JG37 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav9d-4A0A0G2JG37 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav9d-4A0A0G2JG37 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9d-4A0A0G2JG37 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC16.65■□□□□ 0.26
Trav9d-4A0A0G2JG37 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9d-4A0A0G2JG37 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9d-4A0A0G2JG37 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC16.64■□□□□ 0.25
Trav9d-4A0A0G2JG37 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav9d-4A0A0G2JG37 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav9d-4A0A0G2JG37 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav9d-4A0A0G2JG37 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav9d-4A0A0G2JG37 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Trav9d-4A0A0G2JG37 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trav9d-4A0A0G2JG37 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9d-4A0A0G2JG37 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9d-4A0A0G2JG37 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9d-4A0A0G2JG37 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9d-4A0A0G2JG37 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9d-4A0A0G2JG37 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trav9d-4A0A0G2JG37 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9d-4A0A0G2JG37 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9d-4A0A0G2JG37 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Trav9d-4A0A0G2JG37 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9d-4A0A0G2JG37 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9d-4A0A0G2JG37 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9d-4A0A0G2JG37 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav9d-4A0A0G2JG37 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav9d-4A0A0G2JG37 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav9d-4A0A0G2JG37 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav9d-4A0A0G2JG37 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav9d-4A0A0G2JG37 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav9d-4A0A0G2JG37 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav9d-4A0A0G2JG37 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav9d-4A0A0G2JG37 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav9d-4A0A0G2JG37 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trav9d-4A0A0G2JG37 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9d-4A0A0G2JG37 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9d-4A0A0G2JG37 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9d-4A0A0G2JG37 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trav9d-4A0A0G2JG37 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC16.57■□□□□ 0.24
Trav9d-4A0A0G2JG37 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
Trav9d-4A0A0G2JG37 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9d-4A0A0G2JG37 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9d-4A0A0G2JG37 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trav9d-4A0A0G2JG37 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC16.56■□□□□ 0.24
Trav9d-4A0A0G2JG37 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9d-4A0A0G2JG37 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9d-4A0A0G2JG37 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9d-4A0A0G2JG37 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav9d-4A0A0G2JG37 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC16.55■□□□□ 0.24
Trav9d-4A0A0G2JG37 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav9d-4A0A0G2JG37 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav9d-4A0A0G2JG37 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9d-4A0A0G2JG37 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9d-4A0A0G2JG37 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9d-4A0A0G2JG37 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9d-4A0A0G2JG37 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9d-4A0A0G2JG37 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav9d-4A0A0G2JG37 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav9d-4A0A0G2JG37 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
Trav9d-4A0A0G2JG37 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav9d-4A0A0G2JG37 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav9d-4A0A0G2JG37 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav9d-4A0A0G2JG37 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav9d-4A0A0G2JG37 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9d-4A0A0G2JG37 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9d-4A0A0G2JG37 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9d-4A0A0G2JG37 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 9.4 ms