Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trav13n-2A0A0G2JF93 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trav13n-2A0A0G2JF93 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trav13n-2A0A0G2JF93 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav13n-2A0A0G2JF93 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav13n-2A0A0G2JF93 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13n-2A0A0G2JF93 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13n-2A0A0G2JF93 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13n-2A0A0G2JF93 Gm6345-201ENSMUST00000180378 1691 ntBASIC16.19■□□□□ 0.18
Trav13n-2A0A0G2JF93 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13n-2A0A0G2JF93 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13n-2A0A0G2JF93 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13n-2A0A0G2JF93 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13n-2A0A0G2JF93 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13n-2A0A0G2JF93 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13n-2A0A0G2JF93 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13n-2A0A0G2JF93 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13n-2A0A0G2JF93 AL845457.1-201ENSMUST00000197244 68 ntBASIC16.17■□□□□ 0.18
Trav13n-2A0A0G2JF93 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13n-2A0A0G2JF93 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav13n-2A0A0G2JF93 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav13n-2A0A0G2JF93 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Trav13n-2A0A0G2JF93 Rab21-202ENSMUST00000218831 843 ntBASIC16.16■□□□□ 0.18
Trav13n-2A0A0G2JF93 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav13n-2A0A0G2JF93 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Trav13n-2A0A0G2JF93 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13n-2A0A0G2JF93 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13n-2A0A0G2JF93 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13n-2A0A0G2JF93 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC16.15■□□□□ 0.18
Trav13n-2A0A0G2JF93 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trav13n-2A0A0G2JF93 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav13n-2A0A0G2JF93 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13n-2A0A0G2JF93 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13n-2A0A0G2JF93 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC16.13■□□□□ 0.17
Trav13n-2A0A0G2JF93 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13n-2A0A0G2JF93 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13n-2A0A0G2JF93 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13n-2A0A0G2JF93 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13n-2A0A0G2JF93 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trav13n-2A0A0G2JF93 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13n-2A0A0G2JF93 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13n-2A0A0G2JF93 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13n-2A0A0G2JF93 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13n-2A0A0G2JF93 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav13n-2A0A0G2JF93 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Trav13n-2A0A0G2JF93 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13n-2A0A0G2JF93 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13n-2A0A0G2JF93 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13n-2A0A0G2JF93 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13n-2A0A0G2JF93 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13n-2A0A0G2JF93 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
Trav13n-2A0A0G2JF93 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13n-2A0A0G2JF93 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13n-2A0A0G2JF93 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13n-2A0A0G2JF93 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13n-2A0A0G2JF93 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13n-2A0A0G2JF93 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13n-2A0A0G2JF93 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trav13n-2A0A0G2JF93 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trav13n-2A0A0G2JF93 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13n-2A0A0G2JF93 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13n-2A0A0G2JF93 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13n-2A0A0G2JF93 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13n-2A0A0G2JF93 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13n-2A0A0G2JF93 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav13n-2A0A0G2JF93 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav13n-2A0A0G2JF93 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav13n-2A0A0G2JF93 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav13n-2A0A0G2JF93 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav13n-2A0A0G2JF93 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13n-2A0A0G2JF93 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC16.01■□□□□ 0.15
Trav13n-2A0A0G2JF93 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13n-2A0A0G2JF93 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav13n-2A0A0G2JF93 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13n-2A0A0G2JF93 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC16■□□□□ 0.15
Trav13n-2A0A0G2JF93 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13n-2A0A0G2JF93 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13n-2A0A0G2JF93 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trav13n-2A0A0G2JF93 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13n-2A0A0G2JF93 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13n-2A0A0G2JF93 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13n-2A0A0G2JF93 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav13n-2A0A0G2JF93 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13n-2A0A0G2JF93 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13n-2A0A0G2JF93 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13n-2A0A0G2JF93 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13n-2A0A0G2JF93 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trav13n-2A0A0G2JF93 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav13n-2A0A0G2JF93 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.14
Trav13n-2A0A0G2JF93 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13n-2A0A0G2JF93 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13n-2A0A0G2JF93 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13n-2A0A0G2JF93 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13n-2A0A0G2JF93 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13n-2A0A0G2JF93 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
Trav13n-2A0A0G2JF93 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13n-2A0A0G2JF93 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
Trav13n-2A0A0G2JF93 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trav13n-2A0A0G2JF93 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13n-2A0A0G2JF93 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms