Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav3n-3A0A0G2JEM0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav3n-3A0A0G2JEM0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trav3n-3A0A0G2JEM0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav3n-3A0A0G2JEM0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav3n-3A0A0G2JEM0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav3n-3A0A0G2JEM0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav3n-3A0A0G2JEM0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Trav3n-3A0A0G2JEM0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trav3n-3A0A0G2JEM0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.41■□□□□ 0.54
Trav3n-3A0A0G2JEM0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.4■□□□□ 0.54
Trav3n-3A0A0G2JEM0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav3n-3A0A0G2JEM0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Trav3n-3A0A0G2JEM0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trav3n-3A0A0G2JEM0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav3n-3A0A0G2JEM0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav3n-3A0A0G2JEM0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Trav3n-3A0A0G2JEM0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav3n-3A0A0G2JEM0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav3n-3A0A0G2JEM0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav3n-3A0A0G2JEM0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav3n-3A0A0G2JEM0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav3n-3A0A0G2JEM0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav3n-3A0A0G2JEM0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav3n-3A0A0G2JEM0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav3n-3A0A0G2JEM0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav3n-3A0A0G2JEM0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trav3n-3A0A0G2JEM0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav3n-3A0A0G2JEM0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.37■□□□□ 0.53
Trav3n-3A0A0G2JEM0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Trav3n-3A0A0G2JEM0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav3n-3A0A0G2JEM0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav3n-3A0A0G2JEM0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav3n-3A0A0G2JEM0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav3n-3A0A0G2JEM0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav3n-3A0A0G2JEM0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav3n-3A0A0G2JEM0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav3n-3A0A0G2JEM0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav3n-3A0A0G2JEM0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav3n-3A0A0G2JEM0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav3n-3A0A0G2JEM0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav3n-3A0A0G2JEM0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trav3n-3A0A0G2JEM0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav3n-3A0A0G2JEM0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav3n-3A0A0G2JEM0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trav3n-3A0A0G2JEM0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav3n-3A0A0G2JEM0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trav3n-3A0A0G2JEM0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav3n-3A0A0G2JEM0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.32■□□□□ 0.52
Trav3n-3A0A0G2JEM0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav3n-3A0A0G2JEM0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav3n-3A0A0G2JEM0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav3n-3A0A0G2JEM0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav3n-3A0A0G2JEM0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav3n-3A0A0G2JEM0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav3n-3A0A0G2JEM0 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.28■□□□□ 0.52
Trav3n-3A0A0G2JEM0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trav3n-3A0A0G2JEM0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav3n-3A0A0G2JEM0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav3n-3A0A0G2JEM0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.28■□□□□ 0.52
Trav3n-3A0A0G2JEM0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav3n-3A0A0G2JEM0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav3n-3A0A0G2JEM0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Trav3n-3A0A0G2JEM0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav3n-3A0A0G2JEM0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav3n-3A0A0G2JEM0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav3n-3A0A0G2JEM0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav3n-3A0A0G2JEM0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trav3n-3A0A0G2JEM0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav3n-3A0A0G2JEM0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Trav3n-3A0A0G2JEM0 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.25■□□□□ 0.51
Trav3n-3A0A0G2JEM0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav3n-3A0A0G2JEM0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trav3n-3A0A0G2JEM0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.24■□□□□ 0.51
Trav3n-3A0A0G2JEM0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav3n-3A0A0G2JEM0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav3n-3A0A0G2JEM0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav3n-3A0A0G2JEM0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.22■□□□□ 0.51
Trav3n-3A0A0G2JEM0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav3n-3A0A0G2JEM0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav3n-3A0A0G2JEM0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav3n-3A0A0G2JEM0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav3n-3A0A0G2JEM0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav3n-3A0A0G2JEM0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trav3n-3A0A0G2JEM0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav3n-3A0A0G2JEM0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav3n-3A0A0G2JEM0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
Trav3n-3A0A0G2JEM0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav3n-3A0A0G2JEM0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav3n-3A0A0G2JEM0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav3n-3A0A0G2JEM0 Gm27322-201ENSMUST00000184007 104 ntBASIC18.19■□□□□ 0.5
Trav3n-3A0A0G2JEM0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trav3n-3A0A0G2JEM0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav3n-3A0A0G2JEM0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav3n-3A0A0G2JEM0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.17■□□□□ 0.5
Trav3n-3A0A0G2JEM0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav3n-3A0A0G2JEM0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Trav3n-3A0A0G2JEM0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav3n-3A0A0G2JEM0 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.16■□□□□ 0.5
Trav3n-3A0A0G2JEM0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms