Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav9d-1A0A075B699 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav9d-1A0A075B699 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav9d-1A0A075B699 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.99■□□□□ 0.63
Trav9d-1A0A075B699 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trav9d-1A0A075B699 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.98■□□□□ 0.63
Trav9d-1A0A075B699 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav9d-1A0A075B699 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.97■□□□□ 0.63
Trav9d-1A0A075B699 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav9d-1A0A075B699 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav9d-1A0A075B699 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav9d-1A0A075B699 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav9d-1A0A075B699 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav9d-1A0A075B699 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav9d-1A0A075B699 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.94■□□□□ 0.62
Trav9d-1A0A075B699 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav9d-1A0A075B699 Gm24804-201ENSMUST00000174982 85 ntBASIC18.93■□□□□ 0.62
Trav9d-1A0A075B699 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav9d-1A0A075B699 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav9d-1A0A075B699 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.92■□□□□ 0.62
Trav9d-1A0A075B699 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav9d-1A0A075B699 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav9d-1A0A075B699 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Trav9d-1A0A075B699 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.91■□□□□ 0.62
Trav9d-1A0A075B699 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav9d-1A0A075B699 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.91■□□□□ 0.62
Trav9d-1A0A075B699 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav9d-1A0A075B699 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav9d-1A0A075B699 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav9d-1A0A075B699 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trav9d-1A0A075B699 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Trav9d-1A0A075B699 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Trav9d-1A0A075B699 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.88■□□□□ 0.61
Trav9d-1A0A075B699 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav9d-1A0A075B699 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Trav9d-1A0A075B699 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Trav9d-1A0A075B699 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav9d-1A0A075B699 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.86■□□□□ 0.61
Trav9d-1A0A075B699 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav9d-1A0A075B699 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav9d-1A0A075B699 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.85■□□□□ 0.61
Trav9d-1A0A075B699 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav9d-1A0A075B699 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Trav9d-1A0A075B699 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trav9d-1A0A075B699 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav9d-1A0A075B699 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav9d-1A0A075B699 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav9d-1A0A075B699 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav9d-1A0A075B699 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trav9d-1A0A075B699 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav9d-1A0A075B699 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.8■□□□□ 0.6
Trav9d-1A0A075B699 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav9d-1A0A075B699 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav9d-1A0A075B699 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Trav9d-1A0A075B699 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trav9d-1A0A075B699 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav9d-1A0A075B699 Gm16148-201ENSMUST00000119653 893 ntBASIC18.79■□□□□ 0.6
Trav9d-1A0A075B699 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trav9d-1A0A075B699 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav9d-1A0A075B699 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav9d-1A0A075B699 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav9d-1A0A075B699 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav9d-1A0A075B699 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.77■□□□□ 0.6
Trav9d-1A0A075B699 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Trav9d-1A0A075B699 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav9d-1A0A075B699 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trav9d-1A0A075B699 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav9d-1A0A075B699 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav9d-1A0A075B699 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav9d-1A0A075B699 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.74■□□□□ 0.59
Trav9d-1A0A075B699 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav9d-1A0A075B699 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav9d-1A0A075B699 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav9d-1A0A075B699 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav9d-1A0A075B699 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav9d-1A0A075B699 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trav9d-1A0A075B699 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav9d-1A0A075B699 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trav9d-1A0A075B699 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trav9d-1A0A075B699 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trav9d-1A0A075B699 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trav9d-1A0A075B699 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav9d-1A0A075B699 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Trav9d-1A0A075B699 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav9d-1A0A075B699 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav9d-1A0A075B699 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav9d-1A0A075B699 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav9d-1A0A075B699 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trav9d-1A0A075B699 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav9d-1A0A075B699 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav9d-1A0A075B699 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav9d-1A0A075B699 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav9d-1A0A075B699 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav9d-1A0A075B699 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav9d-1A0A075B699 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav9d-1A0A075B699 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav9d-1A0A075B699 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav9d-1A0A075B699 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav9d-1A0A075B699 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav9d-1A0A075B699 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms