Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav9d-3A0A075B695 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav9d-3A0A075B695 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav9d-3A0A075B695 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.47■□□□□ 0.39
Trav9d-3A0A075B695 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trav9d-3A0A075B695 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav9d-3A0A075B695 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav9d-3A0A075B695 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav9d-3A0A075B695 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Trav9d-3A0A075B695 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav9d-3A0A075B695 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav9d-3A0A075B695 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav9d-3A0A075B695 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav9d-3A0A075B695 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Trav9d-3A0A075B695 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav9d-3A0A075B695 Amer2-203ENSMUST00000225247 2662 ntBASIC17.44■□□□□ 0.38
Trav9d-3A0A075B695 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav9d-3A0A075B695 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav9d-3A0A075B695 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav9d-3A0A075B695 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav9d-3A0A075B695 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Trav9d-3A0A075B695 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav9d-3A0A075B695 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav9d-3A0A075B695 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
Trav9d-3A0A075B695 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav9d-3A0A075B695 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav9d-3A0A075B695 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav9d-3A0A075B695 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav9d-3A0A075B695 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav9d-3A0A075B695 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav9d-3A0A075B695 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav9d-3A0A075B695 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav9d-3A0A075B695 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.39■□□□□ 0.38
Trav9d-3A0A075B695 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trav9d-3A0A075B695 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav9d-3A0A075B695 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav9d-3A0A075B695 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav9d-3A0A075B695 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav9d-3A0A075B695 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav9d-3A0A075B695 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav9d-3A0A075B695 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav9d-3A0A075B695 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav9d-3A0A075B695 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.37■□□□□ 0.37
Trav9d-3A0A075B695 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.37■□□□□ 0.37
Trav9d-3A0A075B695 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav9d-3A0A075B695 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav9d-3A0A075B695 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav9d-3A0A075B695 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav9d-3A0A075B695 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav9d-3A0A075B695 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trav9d-3A0A075B695 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav9d-3A0A075B695 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.35■□□□□ 0.37
Trav9d-3A0A075B695 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav9d-3A0A075B695 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav9d-3A0A075B695 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav9d-3A0A075B695 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav9d-3A0A075B695 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav9d-3A0A075B695 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav9d-3A0A075B695 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Trav9d-3A0A075B695 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.32■□□□□ 0.36
Trav9d-3A0A075B695 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav9d-3A0A075B695 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav9d-3A0A075B695 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav9d-3A0A075B695 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trav9d-3A0A075B695 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav9d-3A0A075B695 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trav9d-3A0A075B695 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav9d-3A0A075B695 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav9d-3A0A075B695 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav9d-3A0A075B695 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav9d-3A0A075B695 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Trav9d-3A0A075B695 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav9d-3A0A075B695 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Trav9d-3A0A075B695 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav9d-3A0A075B695 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav9d-3A0A075B695 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trav9d-3A0A075B695 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav9d-3A0A075B695 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav9d-3A0A075B695 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav9d-3A0A075B695 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trav9d-3A0A075B695 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav9d-3A0A075B695 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.25■□□□□ 0.35
Trav9d-3A0A075B695 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav9d-3A0A075B695 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav9d-3A0A075B695 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.23■□□□□ 0.35
Trav9d-3A0A075B695 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav9d-3A0A075B695 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav9d-3A0A075B695 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav9d-3A0A075B695 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav9d-3A0A075B695 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav9d-3A0A075B695 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav9d-3A0A075B695 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav9d-3A0A075B695 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav9d-3A0A075B695 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav9d-3A0A075B695 Zfp131-205ENSMUST00000223812 663 ntBASIC17.21■□□□□ 0.35
Trav9d-3A0A075B695 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC17.21■□□□□ 0.35
Trav9d-3A0A075B695 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav9d-3A0A075B695 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav9d-3A0A075B695 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav9d-3A0A075B695 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms