Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trav18A0A075B656 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav18A0A075B656 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav18A0A075B656 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.23■□□□□ 0.83
Trav18A0A075B656 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav18A0A075B656 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav18A0A075B656 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav18A0A075B656 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav18A0A075B656 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav18A0A075B656 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav18A0A075B656 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav18A0A075B656 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav18A0A075B656 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trav18A0A075B656 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav18A0A075B656 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.18■□□□□ 0.82
Trav18A0A075B656 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav18A0A075B656 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.18■□□□□ 0.82
Trav18A0A075B656 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.17■□□□□ 0.82
Trav18A0A075B656 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Trav18A0A075B656 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trav18A0A075B656 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trav18A0A075B656 Gm24804-201ENSMUST00000174982 85 ntBASIC20.15■□□□□ 0.82
Trav18A0A075B656 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Trav18A0A075B656 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trav18A0A075B656 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav18A0A075B656 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.13■□□□□ 0.81
Trav18A0A075B656 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Trav18A0A075B656 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav18A0A075B656 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trav18A0A075B656 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav18A0A075B656 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.1■□□□□ 0.81
Trav18A0A075B656 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav18A0A075B656 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trav18A0A075B656 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav18A0A075B656 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trav18A0A075B656 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trav18A0A075B656 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
Trav18A0A075B656 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Trav18A0A075B656 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Trav18A0A075B656 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav18A0A075B656 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav18A0A075B656 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trav18A0A075B656 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav18A0A075B656 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trav18A0A075B656 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Trav18A0A075B656 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Trav18A0A075B656 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.03■□□□□ 0.8
Trav18A0A075B656 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trav18A0A075B656 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav18A0A075B656 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav18A0A075B656 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav18A0A075B656 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav18A0A075B656 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav18A0A075B656 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trav18A0A075B656 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trav18A0A075B656 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Trav18A0A075B656 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trav18A0A075B656 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.01■□□□□ 0.79
Trav18A0A075B656 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trav18A0A075B656 Gm16148-201ENSMUST00000119653 893 ntBASIC20■□□□□ 0.79
Trav18A0A075B656 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav18A0A075B656 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Trav18A0A075B656 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trav18A0A075B656 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trav18A0A075B656 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav18A0A075B656 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav18A0A075B656 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav18A0A075B656 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.98■□□□□ 0.79
Trav18A0A075B656 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav18A0A075B656 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trav18A0A075B656 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trav18A0A075B656 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav18A0A075B656 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav18A0A075B656 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trav18A0A075B656 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav18A0A075B656 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav18A0A075B656 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav18A0A075B656 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav18A0A075B656 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav18A0A075B656 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav18A0A075B656 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trav18A0A075B656 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav18A0A075B656 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav18A0A075B656 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Trav18A0A075B656 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Trav18A0A075B656 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav18A0A075B656 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trav18A0A075B656 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav18A0A075B656 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav18A0A075B656 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trav18A0A075B656 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trav18A0A075B656 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Trav18A0A075B656 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav18A0A075B656 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav18A0A075B656 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.87■□□□□ 0.77
Trav18A0A075B656 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav18A0A075B656 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav18A0A075B656 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Trav18A0A075B656 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav18A0A075B656 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms