Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav4-4-dv10A0A075B651 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Trav4-4-dv10A0A075B651 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trav4-4-dv10A0A075B651 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav4-4-dv10A0A075B651 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav4-4-dv10A0A075B651 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trav4-4-dv10A0A075B651 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav4-4-dv10A0A075B651 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.25■□□□□ 0.67
Trav4-4-dv10A0A075B651 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav4-4-dv10A0A075B651 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav4-4-dv10A0A075B651 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav4-4-dv10A0A075B651 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav4-4-dv10A0A075B651 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.22■□□□□ 0.67
Trav4-4-dv10A0A075B651 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trav4-4-dv10A0A075B651 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav4-4-dv10A0A075B651 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav4-4-dv10A0A075B651 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.2■□□□□ 0.66
Trav4-4-dv10A0A075B651 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.2■□□□□ 0.66
Trav4-4-dv10A0A075B651 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav4-4-dv10A0A075B651 Peli2-204ENSMUST00000226513 1320 ntBASIC19.2■□□□□ 0.66
Trav4-4-dv10A0A075B651 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Trav4-4-dv10A0A075B651 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav4-4-dv10A0A075B651 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav4-4-dv10A0A075B651 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Trav4-4-dv10A0A075B651 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trav4-4-dv10A0A075B651 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trav4-4-dv10A0A075B651 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.17■□□□□ 0.66
Trav4-4-dv10A0A075B651 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trav4-4-dv10A0A075B651 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav4-4-dv10A0A075B651 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav4-4-dv10A0A075B651 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav4-4-dv10A0A075B651 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav4-4-dv10A0A075B651 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav4-4-dv10A0A075B651 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trav4-4-dv10A0A075B651 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav4-4-dv10A0A075B651 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Trav4-4-dv10A0A075B651 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Trav4-4-dv10A0A075B651 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav4-4-dv10A0A075B651 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav4-4-dv10A0A075B651 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav4-4-dv10A0A075B651 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trav4-4-dv10A0A075B651 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav4-4-dv10A0A075B651 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav4-4-dv10A0A075B651 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav4-4-dv10A0A075B651 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Trav4-4-dv10A0A075B651 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav4-4-dv10A0A075B651 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav4-4-dv10A0A075B651 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav4-4-dv10A0A075B651 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav4-4-dv10A0A075B651 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
Trav4-4-dv10A0A075B651 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav4-4-dv10A0A075B651 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav4-4-dv10A0A075B651 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trav4-4-dv10A0A075B651 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.07■□□□□ 0.64
Trav4-4-dv10A0A075B651 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav4-4-dv10A0A075B651 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav4-4-dv10A0A075B651 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav4-4-dv10A0A075B651 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav4-4-dv10A0A075B651 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav4-4-dv10A0A075B651 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav4-4-dv10A0A075B651 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav4-4-dv10A0A075B651 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav4-4-dv10A0A075B651 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Trav4-4-dv10A0A075B651 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav4-4-dv10A0A075B651 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Trav4-4-dv10A0A075B651 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Trav4-4-dv10A0A075B651 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav4-4-dv10A0A075B651 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav4-4-dv10A0A075B651 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav4-4-dv10A0A075B651 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Trav4-4-dv10A0A075B651 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trav4-4-dv10A0A075B651 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav4-4-dv10A0A075B651 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav4-4-dv10A0A075B651 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav4-4-dv10A0A075B651 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav4-4-dv10A0A075B651 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav4-4-dv10A0A075B651 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Trav4-4-dv10A0A075B651 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav4-4-dv10A0A075B651 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav4-4-dv10A0A075B651 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
Trav4-4-dv10A0A075B651 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.96■□□□□ 0.63
Trav4-4-dv10A0A075B651 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trav4-4-dv10A0A075B651 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trav4-4-dv10A0A075B651 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav4-4-dv10A0A075B651 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav4-4-dv10A0A075B651 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trav4-4-dv10A0A075B651 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trav4-4-dv10A0A075B651 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Trav4-4-dv10A0A075B651 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav4-4-dv10A0A075B651 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav4-4-dv10A0A075B651 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trav4-4-dv10A0A075B651 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Trav4-4-dv10A0A075B651 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav4-4-dv10A0A075B651 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav4-4-dv10A0A075B651 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav4-4-dv10A0A075B651 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav4-4-dv10A0A075B651 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav4-4-dv10A0A075B651 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav4-4-dv10A0A075B651 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav4-4-dv10A0A075B651 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms