Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6-6A0A075B603 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6-6A0A075B603 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6-6A0A075B603 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Trav6-6A0A075B603 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6-6A0A075B603 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trav6-6A0A075B603 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.21■□□□□ 0.51
Trav6-6A0A075B603 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6-6A0A075B603 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6-6A0A075B603 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6-6A0A075B603 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trav6-6A0A075B603 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trav6-6A0A075B603 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6-6A0A075B603 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6-6A0A075B603 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6-6A0A075B603 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6-6A0A075B603 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6-6A0A075B603 Gm26115-201ENSMUST00000175605 87 ntBASIC18.17■□□□□ 0.5
Trav6-6A0A075B603 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6-6A0A075B603 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav6-6A0A075B603 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trav6-6A0A075B603 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav6-6A0A075B603 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav6-6A0A075B603 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav6-6A0A075B603 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav6-6A0A075B603 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.14■□□□□ 0.49
Trav6-6A0A075B603 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6-6A0A075B603 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6-6A0A075B603 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6-6A0A075B603 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6-6A0A075B603 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6-6A0A075B603 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6-6A0A075B603 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6-6A0A075B603 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6-6A0A075B603 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6-6A0A075B603 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav6-6A0A075B603 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav6-6A0A075B603 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav6-6A0A075B603 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav6-6A0A075B603 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trav6-6A0A075B603 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.09■□□□□ 0.49
Trav6-6A0A075B603 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav6-6A0A075B603 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav6-6A0A075B603 Gm8109-201ENSMUST00000194076 746 ntBASIC18.07■□□□□ 0.48
Trav6-6A0A075B603 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Trav6-6A0A075B603 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6-6A0A075B603 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.05■□□□□ 0.48
Trav6-6A0A075B603 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6-6A0A075B603 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6-6A0A075B603 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Trav6-6A0A075B603 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6-6A0A075B603 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6-6A0A075B603 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.03■□□□□ 0.48
Trav6-6A0A075B603 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.03■□□□□ 0.48
Trav6-6A0A075B603 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
Trav6-6A0A075B603 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6-6A0A075B603 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6-6A0A075B603 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6-6A0A075B603 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6-6A0A075B603 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav6-6A0A075B603 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trav6-6A0A075B603 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Trav6-6A0A075B603 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Trav6-6A0A075B603 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6-6A0A075B603 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6-6A0A075B603 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6-6A0A075B603 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav6-6A0A075B603 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Trav6-6A0A075B603 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.98■□□□□ 0.47
Trav6-6A0A075B603 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trav6-6A0A075B603 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6-6A0A075B603 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.96■□□□□ 0.47
Trav6-6A0A075B603 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC17.96■□□□□ 0.47
Trav6-6A0A075B603 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6-6A0A075B603 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6-6A0A075B603 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6-6A0A075B603 Peli2-204ENSMUST00000226513 1320 ntBASIC17.96■□□□□ 0.46
Trav6-6A0A075B603 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trav6-6A0A075B603 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6-6A0A075B603 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-6A0A075B603 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-6A0A075B603 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-6A0A075B603 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trav6-6A0A075B603 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6-6A0A075B603 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6-6A0A075B603 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trav6-6A0A075B603 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-6A0A075B603 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-6A0A075B603 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-6A0A075B603 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-6A0A075B603 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-6A0A075B603 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-6A0A075B603 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-6A0A075B603 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-6A0A075B603 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trav6-6A0A075B603 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-6A0A075B603 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
Trav6-6A0A075B603 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Trav6-6A0A075B603 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav6-6A0A075B603 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms