Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trav5-1A0A075B5Z7 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trav5-1A0A075B5Z7 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trav5-1A0A075B5Z7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trav5-1A0A075B5Z7 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trav5-1A0A075B5Z7 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.53■■□□□ 1.04
Trav5-1A0A075B5Z7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trav5-1A0A075B5Z7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
Trav5-1A0A075B5Z7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.51■■□□□ 1.03
Trav5-1A0A075B5Z7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.5■■□□□ 1.03
Trav5-1A0A075B5Z7 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Trav5-1A0A075B5Z7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Trav5-1A0A075B5Z7 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trav5-1A0A075B5Z7 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trav5-1A0A075B5Z7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trav5-1A0A075B5Z7 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trav5-1A0A075B5Z7 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trav5-1A0A075B5Z7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trav5-1A0A075B5Z7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trav5-1A0A075B5Z7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trav5-1A0A075B5Z7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trav5-1A0A075B5Z7 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trav5-1A0A075B5Z7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trav5-1A0A075B5Z7 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trav5-1A0A075B5Z7 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.46■■□□□ 1.03
Trav5-1A0A075B5Z7 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trav5-1A0A075B5Z7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.44■■□□□ 1.02
Trav5-1A0A075B5Z7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Trav5-1A0A075B5Z7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trav5-1A0A075B5Z7 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trav5-1A0A075B5Z7 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trav5-1A0A075B5Z7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trav5-1A0A075B5Z7 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trav5-1A0A075B5Z7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trav5-1A0A075B5Z7 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trav5-1A0A075B5Z7 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.37■■□□□ 1.01
Trav5-1A0A075B5Z7 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Trav5-1A0A075B5Z7 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.36■■□□□ 1.01
Trav5-1A0A075B5Z7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trav5-1A0A075B5Z7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Trav5-1A0A075B5Z7 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.35■■□□□ 1.01
Trav5-1A0A075B5Z7 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trav5-1A0A075B5Z7 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.34■■□□□ 1.01
Trav5-1A0A075B5Z7 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
Trav5-1A0A075B5Z7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trav5-1A0A075B5Z7 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trav5-1A0A075B5Z7 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.31■■□□□ 1
Trav5-1A0A075B5Z7 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Trav5-1A0A075B5Z7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trav5-1A0A075B5Z7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Trav5-1A0A075B5Z7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trav5-1A0A075B5Z7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trav5-1A0A075B5Z7 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trav5-1A0A075B5Z7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Trav5-1A0A075B5Z7 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trav5-1A0A075B5Z7 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trav5-1A0A075B5Z7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trav5-1A0A075B5Z7 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trav5-1A0A075B5Z7 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trav5-1A0A075B5Z7 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trav5-1A0A075B5Z7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trav5-1A0A075B5Z7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trav5-1A0A075B5Z7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trav5-1A0A075B5Z7 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Trav5-1A0A075B5Z7 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.23■□□□□ 0.99
Trav5-1A0A075B5Z7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trav5-1A0A075B5Z7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.22■□□□□ 0.99
Trav5-1A0A075B5Z7 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trav5-1A0A075B5Z7 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trav5-1A0A075B5Z7 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trav5-1A0A075B5Z7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.2■□□□□ 0.98
Trav5-1A0A075B5Z7 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.2■□□□□ 0.98
Trav5-1A0A075B5Z7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trav5-1A0A075B5Z7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Trav5-1A0A075B5Z7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Trav5-1A0A075B5Z7 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trav5-1A0A075B5Z7 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trav5-1A0A075B5Z7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Trav5-1A0A075B5Z7 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trav5-1A0A075B5Z7 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trav5-1A0A075B5Z7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav5-1A0A075B5Z7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav5-1A0A075B5Z7 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trav5-1A0A075B5Z7 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trav5-1A0A075B5Z7 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trav5-1A0A075B5Z7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trav5-1A0A075B5Z7 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trav5-1A0A075B5Z7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trav5-1A0A075B5Z7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trav5-1A0A075B5Z7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Trav5-1A0A075B5Z7 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trav5-1A0A075B5Z7 Gm6821-201ENSMUST00000107540 542 ntBASIC21.11■□□□□ 0.97
Trav5-1A0A075B5Z7 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
Trav5-1A0A075B5Z7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trav5-1A0A075B5Z7 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trav5-1A0A075B5Z7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.1■□□□□ 0.97
Trav5-1A0A075B5Z7 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trav5-1A0A075B5Z7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trav5-1A0A075B5Z7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trav5-1A0A075B5Z7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms