Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.3■■□□□ 1
SIT1Q9Y3P8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SIT1Q9Y3P8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
SIT1Q9Y3P8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SIT1Q9Y3P8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.29■■□□□ 1
SIT1Q9Y3P8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SIT1Q9Y3P8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SIT1Q9Y3P8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.29■■□□□ 1
SIT1Q9Y3P8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SIT1Q9Y3P8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SIT1Q9Y3P8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.29■■□□□ 1
SIT1Q9Y3P8 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SIT1Q9Y3P8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.29■■□□□ 1
SIT1Q9Y3P8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SIT1Q9Y3P8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.28■■□□□ 1
SIT1Q9Y3P8 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SIT1Q9Y3P8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SIT1Q9Y3P8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SIT1Q9Y3P8 CDV3P1-201ENST00000471403 739 ntBASIC21.28■■□□□ 1
SIT1Q9Y3P8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.28■■□□□ 1
SIT1Q9Y3P8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SIT1Q9Y3P8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.28■■□□□ 1
SIT1Q9Y3P8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.28■■□□□ 1
SIT1Q9Y3P8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SIT1Q9Y3P8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SIT1Q9Y3P8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SIT1Q9Y3P8 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SIT1Q9Y3P8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.27■■□□□ 1
SIT1Q9Y3P8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SIT1Q9Y3P8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.27■■□□□ 1
SIT1Q9Y3P8 BX088651.1-201ENST00000540551 451 ntBASIC21.27■■□□□ 1
SIT1Q9Y3P8 AC233263.1-201ENST00000578059 224 ntBASIC21.27■■□□□ 1
SIT1Q9Y3P8 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.27■■□□□ 1
SIT1Q9Y3P8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SIT1Q9Y3P8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SIT1Q9Y3P8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.27■□□□□ 0.99
SIT1Q9Y3P8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIT1Q9Y3P8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIT1Q9Y3P8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIT1Q9Y3P8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SIT1Q9Y3P8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.26■□□□□ 0.99
SIT1Q9Y3P8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.26■□□□□ 0.99
SIT1Q9Y3P8 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.26■□□□□ 0.99
SIT1Q9Y3P8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.26■□□□□ 0.99
SIT1Q9Y3P8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.26■□□□□ 0.99
SIT1Q9Y3P8 AC069544.1-201ENST00000609399 999 ntBASIC21.26■□□□□ 0.99
SIT1Q9Y3P8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SIT1Q9Y3P8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.26■□□□□ 0.99
SIT1Q9Y3P8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
SIT1Q9Y3P8 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIT1Q9Y3P8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.26■□□□□ 0.99
SIT1Q9Y3P8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIT1Q9Y3P8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIT1Q9Y3P8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIT1Q9Y3P8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIT1Q9Y3P8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SIT1Q9Y3P8 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.25■□□□□ 0.99
SIT1Q9Y3P8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SIT1Q9Y3P8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SIT1Q9Y3P8 MCRIP2P1-201ENST00000394346 511 ntBASIC21.25■□□□□ 0.99
SIT1Q9Y3P8 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.25■□□□□ 0.99
SIT1Q9Y3P8 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.25■□□□□ 0.99
SIT1Q9Y3P8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SIT1Q9Y3P8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SIT1Q9Y3P8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SIT1Q9Y3P8 KRT17P2-201ENST00000300992 1314 ntBASIC21.25■□□□□ 0.99
SIT1Q9Y3P8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SIT1Q9Y3P8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SIT1Q9Y3P8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
SIT1Q9Y3P8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.24■□□□□ 0.99
SIT1Q9Y3P8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SIT1Q9Y3P8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SIT1Q9Y3P8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIT1Q9Y3P8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SIT1Q9Y3P8 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SIT1Q9Y3P8 AC091799.1-201ENST00000422823 811 ntBASIC21.24■□□□□ 0.99
SIT1Q9Y3P8 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SIT1Q9Y3P8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
SIT1Q9Y3P8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIT1Q9Y3P8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.24■□□□□ 0.99
SIT1Q9Y3P8 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIT1Q9Y3P8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.24■□□□□ 0.99
SIT1Q9Y3P8 SOX15-203ENST00000570788 1093 ntBASIC21.24■□□□□ 0.99
SIT1Q9Y3P8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SIT1Q9Y3P8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SIT1Q9Y3P8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIT1Q9Y3P8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.23■□□□□ 0.99
SIT1Q9Y3P8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SIT1Q9Y3P8 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.23■□□□□ 0.99
SIT1Q9Y3P8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SIT1Q9Y3P8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
SIT1Q9Y3P8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.23■□□□□ 0.99
SIT1Q9Y3P8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIT1Q9Y3P8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SIT1Q9Y3P8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SIT1Q9Y3P8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SIT1Q9Y3P8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.22■□□□□ 0.99
SIT1Q9Y3P8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.22■□□□□ 0.99
SIT1Q9Y3P8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
SIT1Q9Y3P8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms