Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ClcnkaQ9WUB7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ClcnkaQ9WUB7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ClcnkaQ9WUB7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
ClcnkaQ9WUB7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
ClcnkaQ9WUB7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
ClcnkaQ9WUB7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
ClcnkaQ9WUB7 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.95■□□□□ 0.3
ClcnkaQ9WUB7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClcnkaQ9WUB7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClcnkaQ9WUB7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClcnkaQ9WUB7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ClcnkaQ9WUB7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClcnkaQ9WUB7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClcnkaQ9WUB7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
ClcnkaQ9WUB7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.95■□□□□ 0.3
ClcnkaQ9WUB7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ClcnkaQ9WUB7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClcnkaQ9WUB7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
ClcnkaQ9WUB7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClcnkaQ9WUB7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClcnkaQ9WUB7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.95■□□□□ 0.3
ClcnkaQ9WUB7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClcnkaQ9WUB7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ClcnkaQ9WUB7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClcnkaQ9WUB7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
ClcnkaQ9WUB7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClcnkaQ9WUB7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClcnkaQ9WUB7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClcnkaQ9WUB7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClcnkaQ9WUB7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.94■□□□□ 0.3
ClcnkaQ9WUB7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClcnkaQ9WUB7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ClcnkaQ9WUB7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClcnkaQ9WUB7 Gm26571-201ENSMUST00000181399 666 ntBASIC16.94■□□□□ 0.3
ClcnkaQ9WUB7 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.94■□□□□ 0.3
ClcnkaQ9WUB7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClcnkaQ9WUB7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClcnkaQ9WUB7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ClcnkaQ9WUB7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.94■□□□□ 0.3
ClcnkaQ9WUB7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClcnkaQ9WUB7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClcnkaQ9WUB7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ClcnkaQ9WUB7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClcnkaQ9WUB7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClcnkaQ9WUB7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClcnkaQ9WUB7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ClcnkaQ9WUB7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClcnkaQ9WUB7 Gm7514-201ENSMUST00000209475 934 ntBASIC16.93■□□□□ 0.3
ClcnkaQ9WUB7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.93■□□□□ 0.3
ClcnkaQ9WUB7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ClcnkaQ9WUB7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClcnkaQ9WUB7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ClcnkaQ9WUB7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClcnkaQ9WUB7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClcnkaQ9WUB7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClcnkaQ9WUB7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClcnkaQ9WUB7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClcnkaQ9WUB7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
ClcnkaQ9WUB7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClcnkaQ9WUB7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClcnkaQ9WUB7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClcnkaQ9WUB7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClcnkaQ9WUB7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ClcnkaQ9WUB7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClcnkaQ9WUB7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClcnkaQ9WUB7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClcnkaQ9WUB7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClcnkaQ9WUB7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ClcnkaQ9WUB7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ClcnkaQ9WUB7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClcnkaQ9WUB7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.92■□□□□ 0.3
ClcnkaQ9WUB7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClcnkaQ9WUB7 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClcnkaQ9WUB7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
ClcnkaQ9WUB7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ClcnkaQ9WUB7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ClcnkaQ9WUB7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClcnkaQ9WUB7 Gm42569-201ENSMUST00000200539 472 ntBASIC16.92■□□□□ 0.3
ClcnkaQ9WUB7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClcnkaQ9WUB7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClcnkaQ9WUB7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
ClcnkaQ9WUB7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClcnkaQ9WUB7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ClcnkaQ9WUB7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClcnkaQ9WUB7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClcnkaQ9WUB7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClcnkaQ9WUB7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ClcnkaQ9WUB7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClcnkaQ9WUB7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClcnkaQ9WUB7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClcnkaQ9WUB7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClcnkaQ9WUB7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClcnkaQ9WUB7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClcnkaQ9WUB7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
ClcnkaQ9WUB7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClcnkaQ9WUB7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClcnkaQ9WUB7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ClcnkaQ9WUB7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClcnkaQ9WUB7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 143.7 ms