Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
SHANK2Q9UPX8 AC100791.3-201ENST00000617619 330 ntBASIC31.53■■■□□ 2.64
SHANK2Q9UPX8 C1orf229-201ENST00000623686 2258 ntBASIC31.53■■■□□ 2.64
SHANK2Q9UPX8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC31.53■■■□□ 2.64
SHANK2Q9UPX8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
SHANK2Q9UPX8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC31.53■■■□□ 2.64
SHANK2Q9UPX8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SHANK2Q9UPX8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC31.52■■■□□ 2.64
SHANK2Q9UPX8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC31.52■■■□□ 2.64
SHANK2Q9UPX8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC31.52■■■□□ 2.64
SHANK2Q9UPX8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SHANK2Q9UPX8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
SHANK2Q9UPX8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SHANK2Q9UPX8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SHANK2Q9UPX8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SHANK2Q9UPX8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SHANK2Q9UPX8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SHANK2Q9UPX8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SHANK2Q9UPX8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SHANK2Q9UPX8 AC010542.4-201ENST00000563151 1910 ntBASIC31.52■■■□□ 2.64
SHANK2Q9UPX8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
SHANK2Q9UPX8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
SHANK2Q9UPX8 C11orf96-202ENST00000528572 1834 ntBASIC31.52■■■□□ 2.64
SHANK2Q9UPX8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC31.52■■■□□ 2.64
SHANK2Q9UPX8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
SHANK2Q9UPX8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC31.52■■■□□ 2.64
SHANK2Q9UPX8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC31.52■■■□□ 2.64
SHANK2Q9UPX8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC31.52■■■□□ 2.64
SHANK2Q9UPX8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC31.52■■■□□ 2.64
SHANK2Q9UPX8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SHANK2Q9UPX8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
SHANK2Q9UPX8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.64
SHANK2Q9UPX8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC31.51■■■□□ 2.64
SHANK2Q9UPX8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
SHANK2Q9UPX8 KRT17P1-201ENST00000399211 1546 ntBASIC31.51■■■□□ 2.63
SHANK2Q9UPX8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
SHANK2Q9UPX8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.63
SHANK2Q9UPX8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
SHANK2Q9UPX8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
SHANK2Q9UPX8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
SHANK2Q9UPX8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC31.51■■■□□ 2.63
SHANK2Q9UPX8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC31.51■■■□□ 2.63
SHANK2Q9UPX8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC31.51■■■□□ 2.63
SHANK2Q9UPX8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
SHANK2Q9UPX8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC31.5■■■□□ 2.63
SHANK2Q9UPX8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SHANK2Q9UPX8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC31.5■■■□□ 2.63
SHANK2Q9UPX8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SHANK2Q9UPX8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC31.5■■■□□ 2.63
SHANK2Q9UPX8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SHANK2Q9UPX8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC31.5■■■□□ 2.63
SHANK2Q9UPX8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
SHANK2Q9UPX8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SHANK2Q9UPX8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SHANK2Q9UPX8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC31.49■■■□□ 2.63
SHANK2Q9UPX8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC31.49■■■□□ 2.63
SHANK2Q9UPX8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
SHANK2Q9UPX8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC31.49■■■□□ 2.63
SHANK2Q9UPX8 AC097658.1-201ENST00000475555 843 ntBASIC31.49■■■□□ 2.63
SHANK2Q9UPX8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC31.49■■■□□ 2.63
SHANK2Q9UPX8 CYP2T3P-201ENST00000601990 817 ntBASIC31.49■■■□□ 2.63
SHANK2Q9UPX8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC31.49■■■□□ 2.63
SHANK2Q9UPX8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC31.49■■■□□ 2.63
SHANK2Q9UPX8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC31.49■■■□□ 2.63
SHANK2Q9UPX8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SHANK2Q9UPX8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
SHANK2Q9UPX8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
SHANK2Q9UPX8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
SHANK2Q9UPX8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC31.48■■■□□ 2.63
SHANK2Q9UPX8 SERPINH1P1-201ENST00000419794 1249 ntBASIC31.48■■■□□ 2.63
SHANK2Q9UPX8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC31.48■■■□□ 2.63
SHANK2Q9UPX8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC31.48■■■□□ 2.63
SHANK2Q9UPX8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC31.48■■■□□ 2.63
SHANK2Q9UPX8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC31.47■■■□□ 2.63
SHANK2Q9UPX8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
SHANK2Q9UPX8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
SHANK2Q9UPX8 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SHANK2Q9UPX8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
SHANK2Q9UPX8 SAPCD2P1-201ENST00000395413 1184 ntBASIC31.47■■■□□ 2.63
SHANK2Q9UPX8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC31.47■■■□□ 2.63
SHANK2Q9UPX8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SHANK2Q9UPX8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC31.47■■■□□ 2.63
SHANK2Q9UPX8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC31.47■■■□□ 2.63
SHANK2Q9UPX8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC31.47■■■□□ 2.63
SHANK2Q9UPX8 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC31.47■■■□□ 2.63
SHANK2Q9UPX8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC31.47■■■□□ 2.63
SHANK2Q9UPX8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC31.47■■■□□ 2.63
SHANK2Q9UPX8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SHANK2Q9UPX8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
SHANK2Q9UPX8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC31.46■■■□□ 2.63
SHANK2Q9UPX8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SHANK2Q9UPX8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SHANK2Q9UPX8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC31.46■■■□□ 2.63
SHANK2Q9UPX8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SHANK2Q9UPX8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC31.46■■■□□ 2.63
SHANK2Q9UPX8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
SHANK2Q9UPX8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
SHANK2Q9UPX8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC31.46■■■□□ 2.63
SHANK2Q9UPX8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SHANK2Q9UPX8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms