Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.08■□□□□ 0.81
NDC1Q9BTX1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.08■□□□□ 0.81
NDC1Q9BTX1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
NDC1Q9BTX1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.08■□□□□ 0.8
NDC1Q9BTX1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NDC1Q9BTX1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
NDC1Q9BTX1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
NDC1Q9BTX1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.08■□□□□ 0.8
NDC1Q9BTX1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NDC1Q9BTX1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NDC1Q9BTX1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
NDC1Q9BTX1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NDC1Q9BTX1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
NDC1Q9BTX1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NDC1Q9BTX1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NDC1Q9BTX1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NDC1Q9BTX1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.07■□□□□ 0.8
NDC1Q9BTX1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.07■□□□□ 0.8
NDC1Q9BTX1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.07■□□□□ 0.8
NDC1Q9BTX1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.07■□□□□ 0.8
NDC1Q9BTX1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
NDC1Q9BTX1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.07■□□□□ 0.8
NDC1Q9BTX1 AC231657.2-201ENST00000624556 255 ntBASIC20.07■□□□□ 0.8
NDC1Q9BTX1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
NDC1Q9BTX1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NDC1Q9BTX1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.07■□□□□ 0.8
NDC1Q9BTX1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.07■□□□□ 0.8
NDC1Q9BTX1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
NDC1Q9BTX1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NDC1Q9BTX1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
NDC1Q9BTX1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NDC1Q9BTX1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NDC1Q9BTX1 FAM99A-202ENST00000538190 1989 ntBASIC20.06■□□□□ 0.8
NDC1Q9BTX1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.06■□□□□ 0.8
NDC1Q9BTX1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.06■□□□□ 0.8
NDC1Q9BTX1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NDC1Q9BTX1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NDC1Q9BTX1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NDC1Q9BTX1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.06■□□□□ 0.8
NDC1Q9BTX1 ID1-201ENST00000376105 1233 ntBASIC20.06■□□□□ 0.8
NDC1Q9BTX1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NDC1Q9BTX1 SLC7A5P2-201ENST00000553010 536 ntBASIC20.06■□□□□ 0.8
NDC1Q9BTX1 SLC7A5P1-201ENST00000568957 537 ntBASIC20.06■□□□□ 0.8
NDC1Q9BTX1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.06■□□□□ 0.8
NDC1Q9BTX1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NDC1Q9BTX1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
NDC1Q9BTX1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NDC1Q9BTX1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NDC1Q9BTX1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
NDC1Q9BTX1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.05■□□□□ 0.8
NDC1Q9BTX1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NDC1Q9BTX1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
NDC1Q9BTX1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NDC1Q9BTX1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
NDC1Q9BTX1 AC007322.1-201ENST00000426983 750 ntBASIC20.05■□□□□ 0.8
NDC1Q9BTX1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
NDC1Q9BTX1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NDC1Q9BTX1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NDC1Q9BTX1 DUX4L16-201ENST00000555130 1264 ntBASIC20.05■□□□□ 0.8
NDC1Q9BTX1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.05■□□□□ 0.8
NDC1Q9BTX1 AC010536.3-201ENST00000620306 533 ntBASIC20.05■□□□□ 0.8
NDC1Q9BTX1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NDC1Q9BTX1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
NDC1Q9BTX1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.05■□□□□ 0.8
NDC1Q9BTX1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NDC1Q9BTX1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.05■□□□□ 0.8
NDC1Q9BTX1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
NDC1Q9BTX1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NDC1Q9BTX1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NDC1Q9BTX1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
NDC1Q9BTX1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NDC1Q9BTX1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NDC1Q9BTX1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NDC1Q9BTX1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.04■□□□□ 0.8
NDC1Q9BTX1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NDC1Q9BTX1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NDC1Q9BTX1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NDC1Q9BTX1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
NDC1Q9BTX1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.04■□□□□ 0.8
NDC1Q9BTX1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NDC1Q9BTX1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NDC1Q9BTX1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.04■□□□□ 0.8
NDC1Q9BTX1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.04■□□□□ 0.8
NDC1Q9BTX1 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.04■□□□□ 0.8
NDC1Q9BTX1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NDC1Q9BTX1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
NDC1Q9BTX1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NDC1Q9BTX1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NDC1Q9BTX1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NDC1Q9BTX1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NDC1Q9BTX1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NDC1Q9BTX1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
NDC1Q9BTX1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NDC1Q9BTX1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
NDC1Q9BTX1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.03■□□□□ 0.8
NDC1Q9BTX1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NDC1Q9BTX1 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.03■□□□□ 0.8
NDC1Q9BTX1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.03■□□□□ 0.8
NDC1Q9BTX1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.03■□□□□ 0.8
NDC1Q9BTX1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms