Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.83■□□□□ 0.6
Trem2Q99NH8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Trem2Q99NH8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trem2Q99NH8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trem2Q99NH8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trem2Q99NH8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.83■□□□□ 0.6
Trem2Q99NH8 Grk6-206ENSMUST00000224995 2971 ntBASIC18.82■□□□□ 0.6
Trem2Q99NH8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trem2Q99NH8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trem2Q99NH8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trem2Q99NH8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trem2Q99NH8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.82■□□□□ 0.6
Trem2Q99NH8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.82■□□□□ 0.6
Trem2Q99NH8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trem2Q99NH8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trem2Q99NH8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trem2Q99NH8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trem2Q99NH8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trem2Q99NH8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trem2Q99NH8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trem2Q99NH8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.82■□□□□ 0.6
Trem2Q99NH8 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.81■□□□□ 0.6
Trem2Q99NH8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trem2Q99NH8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trem2Q99NH8 Gm6420-201ENSMUST00000193885 723 ntBASIC18.81■□□□□ 0.6
Trem2Q99NH8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.81■□□□□ 0.6
Trem2Q99NH8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trem2Q99NH8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trem2Q99NH8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Trem2Q99NH8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trem2Q99NH8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trem2Q99NH8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trem2Q99NH8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trem2Q99NH8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trem2Q99NH8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trem2Q99NH8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trem2Q99NH8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trem2Q99NH8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trem2Q99NH8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.8■□□□□ 0.6
Trem2Q99NH8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.8■□□□□ 0.6
Trem2Q99NH8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trem2Q99NH8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trem2Q99NH8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trem2Q99NH8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trem2Q99NH8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trem2Q99NH8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Trem2Q99NH8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trem2Q99NH8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trem2Q99NH8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trem2Q99NH8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trem2Q99NH8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Trem2Q99NH8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.79■□□□□ 0.6
Trem2Q99NH8 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.79■□□□□ 0.6
Trem2Q99NH8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trem2Q99NH8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trem2Q99NH8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trem2Q99NH8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trem2Q99NH8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Trem2Q99NH8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trem2Q99NH8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.78■□□□□ 0.6
Trem2Q99NH8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trem2Q99NH8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trem2Q99NH8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trem2Q99NH8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trem2Q99NH8 Gm22325-201ENSMUST00000158904 308 ntBASIC18.78■□□□□ 0.6
Trem2Q99NH8 Gm7514-201ENSMUST00000209475 934 ntBASIC18.78■□□□□ 0.6
Trem2Q99NH8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trem2Q99NH8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trem2Q99NH8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Trem2Q99NH8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trem2Q99NH8 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.77■□□□□ 0.6
Trem2Q99NH8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trem2Q99NH8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trem2Q99NH8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.77■□□□□ 0.6
Trem2Q99NH8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Trem2Q99NH8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trem2Q99NH8 Nespas-201ENSMUST00000143738 1083 ntBASIC18.77■□□□□ 0.6
Trem2Q99NH8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trem2Q99NH8 Gm42642-201ENSMUST00000200683 355 ntBASIC18.77■□□□□ 0.6
Trem2Q99NH8 Gm18671-201ENSMUST00000214826 683 ntBASIC18.77■□□□□ 0.6
Trem2Q99NH8 Gm5874-201ENSMUST00000096101 508 ntBASIC18.77■□□□□ 0.6
Trem2Q99NH8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trem2Q99NH8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trem2Q99NH8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.77■□□□□ 0.59
Trem2Q99NH8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trem2Q99NH8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trem2Q99NH8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trem2Q99NH8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trem2Q99NH8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trem2Q99NH8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.76■□□□□ 0.59
Trem2Q99NH8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.76■□□□□ 0.59
Trem2Q99NH8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trem2Q99NH8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trem2Q99NH8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Trem2Q99NH8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trem2Q99NH8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
Trem2Q99NH8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trem2Q99NH8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Trem2Q99NH8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.76■□□□□ 0.59
Trem2Q99NH8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms