Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC26.18■■□□□ 1.78
DDX60Q8IY21 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX60Q8IY21 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC26.18■■□□□ 1.78
DDX60Q8IY21 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC26.18■■□□□ 1.78
DDX60Q8IY21 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX60Q8IY21 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX60Q8IY21 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC26.18■■□□□ 1.78
DDX60Q8IY21 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX60Q8IY21 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX60Q8IY21 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC26.18■■□□□ 1.78
DDX60Q8IY21 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
DDX60Q8IY21 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
DDX60Q8IY21 AC008687.6-201ENST00000596318 630 ntBASIC26.17■■□□□ 1.78
DDX60Q8IY21 AC008694.1-202ENST00000636953 945 ntBASIC26.17■■□□□ 1.78
DDX60Q8IY21 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC26.17■■□□□ 1.78
DDX60Q8IY21 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
DDX60Q8IY21 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC26.17■■□□□ 1.78
DDX60Q8IY21 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
DDX60Q8IY21 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
DDX60Q8IY21 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC26.17■■□□□ 1.78
DDX60Q8IY21 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC26.17■■□□□ 1.78
DDX60Q8IY21 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC26.17■■□□□ 1.78
DDX60Q8IY21 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC26.17■■□□□ 1.78
DDX60Q8IY21 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC26.17■■□□□ 1.78
DDX60Q8IY21 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
DDX60Q8IY21 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC26.16■■□□□ 1.78
DDX60Q8IY21 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
DDX60Q8IY21 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC26.16■■□□□ 1.78
DDX60Q8IY21 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
DDX60Q8IY21 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
DDX60Q8IY21 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC26.16■■□□□ 1.78
DDX60Q8IY21 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC26.16■■□□□ 1.78
DDX60Q8IY21 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC26.16■■□□□ 1.78
DDX60Q8IY21 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC26.16■■□□□ 1.78
DDX60Q8IY21 AL591742.1-201ENST00000604433 565 ntBASIC26.16■■□□□ 1.78
DDX60Q8IY21 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
DDX60Q8IY21 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC26.16■■□□□ 1.78
DDX60Q8IY21 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
DDX60Q8IY21 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
DDX60Q8IY21 KRT17P1-201ENST00000399211 1546 ntBASIC26.15■■□□□ 1.78
DDX60Q8IY21 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
DDX60Q8IY21 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
DDX60Q8IY21 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
DDX60Q8IY21 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
DDX60Q8IY21 GAS7-202ENST00000396115 929 ntTSL 5 BASIC26.15■■□□□ 1.78
DDX60Q8IY21 AL355472.2-201ENST00000422958 438 ntBASIC26.15■■□□□ 1.78
DDX60Q8IY21 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
DDX60Q8IY21 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
DDX60Q8IY21 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC26.14■■□□□ 1.78
DDX60Q8IY21 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC26.14■■□□□ 1.78
DDX60Q8IY21 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC26.14■■□□□ 1.78
DDX60Q8IY21 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
DDX60Q8IY21 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
DDX60Q8IY21 INO80E-214ENST00000620599 515 ntTSL 2 BASIC26.14■■□□□ 1.78
DDX60Q8IY21 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
DDX60Q8IY21 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
DDX60Q8IY21 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
DDX60Q8IY21 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
DDX60Q8IY21 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
DDX60Q8IY21 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC26.14■■□□□ 1.78
DDX60Q8IY21 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
DDX60Q8IY21 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC26.14■■□□□ 1.77
DDX60Q8IY21 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
DDX60Q8IY21 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
DDX60Q8IY21 AC093827.2-201ENST00000512654 315 ntBASIC26.14■■□□□ 1.77
DDX60Q8IY21 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC26.13■■□□□ 1.77
DDX60Q8IY21 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
DDX60Q8IY21 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC26.13■■□□□ 1.77
DDX60Q8IY21 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC26.13■■□□□ 1.77
DDX60Q8IY21 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
DDX60Q8IY21 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
DDX60Q8IY21 FAM201B-201ENST00000458407 597 ntBASIC26.13■■□□□ 1.77
DDX60Q8IY21 RPS2P52-201ENST00000469610 820 ntBASIC26.13■■□□□ 1.77
DDX60Q8IY21 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC26.13■■□□□ 1.77
DDX60Q8IY21 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
DDX60Q8IY21 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC26.13■■□□□ 1.77
DDX60Q8IY21 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
DDX60Q8IY21 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
DDX60Q8IY21 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC26.13■■□□□ 1.77
DDX60Q8IY21 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
DDX60Q8IY21 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
DDX60Q8IY21 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC26.12■■□□□ 1.77
DDX60Q8IY21 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC26.12■■□□□ 1.77
DDX60Q8IY21 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
DDX60Q8IY21 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC26.12■■□□□ 1.77
DDX60Q8IY21 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
DDX60Q8IY21 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
DDX60Q8IY21 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC26.12■■□□□ 1.77
DDX60Q8IY21 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
DDX60Q8IY21 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
DDX60Q8IY21 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
DDX60Q8IY21 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
DDX60Q8IY21 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
DDX60Q8IY21 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
DDX60Q8IY21 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC26.11■■□□□ 1.77
DDX60Q8IY21 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
DDX60Q8IY21 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
DDX60Q8IY21 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC26.11■■□□□ 1.77
DDX60Q8IY21 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.11■■□□□ 1.77
DDX60Q8IY21 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms