Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
TTC39AQ5SRH9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TTC39AQ5SRH9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TTC39AQ5SRH9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
TTC39AQ5SRH9 NARF-205ENST00000412079 1760 ntTSL 5 BASIC25.66■■□□□ 1.7
TTC39AQ5SRH9 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC25.66■■□□□ 1.7
TTC39AQ5SRH9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TTC39AQ5SRH9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC25.65■■□□□ 1.7
TTC39AQ5SRH9 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TTC39AQ5SRH9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TTC39AQ5SRH9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TTC39AQ5SRH9 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC25.65■■□□□ 1.7
TTC39AQ5SRH9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC25.65■■□□□ 1.7
TTC39AQ5SRH9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC25.65■■□□□ 1.7
TTC39AQ5SRH9 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC25.65■■□□□ 1.7
TTC39AQ5SRH9 MAZ-216ENST00000616501 991 ntTSL 5 BASIC25.65■■□□□ 1.7
TTC39AQ5SRH9 AC231657.2-201ENST00000624556 255 ntBASIC25.65■■□□□ 1.7
TTC39AQ5SRH9 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
TTC39AQ5SRH9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC25.65■■□□□ 1.7
TTC39AQ5SRH9 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC25.65■■□□□ 1.7
TTC39AQ5SRH9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TTC39AQ5SRH9 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
TTC39AQ5SRH9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC25.64■■□□□ 1.7
TTC39AQ5SRH9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC25.64■■□□□ 1.7
TTC39AQ5SRH9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
TTC39AQ5SRH9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TTC39AQ5SRH9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TTC39AQ5SRH9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC25.64■■□□□ 1.7
TTC39AQ5SRH9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC25.64■■□□□ 1.7
TTC39AQ5SRH9 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
TTC39AQ5SRH9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC25.64■■□□□ 1.7
TTC39AQ5SRH9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TTC39AQ5SRH9 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC25.64■■□□□ 1.7
TTC39AQ5SRH9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC25.64■■□□□ 1.7
TTC39AQ5SRH9 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC25.64■■□□□ 1.7
TTC39AQ5SRH9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
TTC39AQ5SRH9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC25.64■■□□□ 1.69
TTC39AQ5SRH9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
TTC39AQ5SRH9 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
TTC39AQ5SRH9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
TTC39AQ5SRH9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
TTC39AQ5SRH9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TTC39AQ5SRH9 CROCCP5-201ENST00000436658 830 ntBASIC25.63■■□□□ 1.69
TTC39AQ5SRH9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
TTC39AQ5SRH9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
TTC39AQ5SRH9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC25.63■■□□□ 1.69
TTC39AQ5SRH9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
TTC39AQ5SRH9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC25.63■■□□□ 1.69
TTC39AQ5SRH9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
TTC39AQ5SRH9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TTC39AQ5SRH9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TTC39AQ5SRH9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC25.62■■□□□ 1.69
TTC39AQ5SRH9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC25.62■■□□□ 1.69
TTC39AQ5SRH9 AC007322.1-201ENST00000426983 750 ntBASIC25.62■■□□□ 1.69
TTC39AQ5SRH9 UQCRFS1P1-201ENST00000435169 820 ntBASIC25.62■■□□□ 1.69
TTC39AQ5SRH9 TERF1P5-201ENST00000477545 1207 ntBASIC25.62■■□□□ 1.69
TTC39AQ5SRH9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC25.62■■□□□ 1.69
TTC39AQ5SRH9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC25.62■■□□□ 1.69
TTC39AQ5SRH9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
TTC39AQ5SRH9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TTC39AQ5SRH9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TTC39AQ5SRH9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TTC39AQ5SRH9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
TTC39AQ5SRH9 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TTC39AQ5SRH9 MIR663A-201ENST00000385250 93 ntBASIC25.61■■□□□ 1.69
TTC39AQ5SRH9 CNN2P6-201ENST00000439038 900 ntBASIC25.61■■□□□ 1.69
TTC39AQ5SRH9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC25.61■■□□□ 1.69
TTC39AQ5SRH9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC25.61■■□□□ 1.69
TTC39AQ5SRH9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC25.61■■□□□ 1.69
TTC39AQ5SRH9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC25.61■■□□□ 1.69
TTC39AQ5SRH9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
TTC39AQ5SRH9 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TTC39AQ5SRH9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TTC39AQ5SRH9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC25.6■■□□□ 1.69
TTC39AQ5SRH9 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC25.6■■□□□ 1.69
TTC39AQ5SRH9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
TTC39AQ5SRH9 AC006970.2-201ENST00000450065 779 ntBASIC25.6■■□□□ 1.69
TTC39AQ5SRH9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TTC39AQ5SRH9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC25.6■■□□□ 1.69
TTC39AQ5SRH9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TTC39AQ5SRH9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC25.6■■□□□ 1.69
TTC39AQ5SRH9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TTC39AQ5SRH9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC25.59■■□□□ 1.69
TTC39AQ5SRH9 STK25-234ENST00000535007 2459 ntTSL 2 BASIC25.59■■□□□ 1.69
TTC39AQ5SRH9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
TTC39AQ5SRH9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TTC39AQ5SRH9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
TTC39AQ5SRH9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC25.59■■□□□ 1.69
TTC39AQ5SRH9 PPP1R14BP3-201ENST00000509033 445 ntBASIC25.59■■□□□ 1.69
TTC39AQ5SRH9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC25.59■■□□□ 1.69
TTC39AQ5SRH9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC25.59■■□□□ 1.69
TTC39AQ5SRH9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC25.59■■□□□ 1.69
TTC39AQ5SRH9 FGF8-207ENST00000618991 856 ntTSL 3 BASIC25.59■■□□□ 1.69
TTC39AQ5SRH9 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TTC39AQ5SRH9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TTC39AQ5SRH9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TTC39AQ5SRH9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TTC39AQ5SRH9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
TTC39AQ5SRH9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC25.59■■□□□ 1.69
TTC39AQ5SRH9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms