Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.5■□□□□ 0.55
LRRK2Q5S007 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRRK2Q5S007 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRRK2Q5S007 KRT18P57-201ENST00000443599 1254 ntBASIC18.5■□□□□ 0.55
LRRK2Q5S007 AC100791.3-201ENST00000617619 330 ntBASIC18.5■□□□□ 0.55
LRRK2Q5S007 AP006587.3-201ENST00000525742 1516 ntBASIC18.5■□□□□ 0.55
LRRK2Q5S007 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRK2Q5S007 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
LRRK2Q5S007 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRK2Q5S007 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.49■□□□□ 0.55
LRRK2Q5S007 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRK2Q5S007 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRK2Q5S007 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRK2Q5S007 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.49■□□□□ 0.55
LRRK2Q5S007 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LRRK2Q5S007 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.49■□□□□ 0.55
LRRK2Q5S007 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
LRRK2Q5S007 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.49■□□□□ 0.55
LRRK2Q5S007 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRK2Q5S007 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.49■□□□□ 0.55
LRRK2Q5S007 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.49■□□□□ 0.55
LRRK2Q5S007 AC124016.1-201ENST00000609552 612 ntBASIC18.49■□□□□ 0.55
LRRK2Q5S007 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRK2Q5S007 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRK2Q5S007 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRK2Q5S007 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRK2Q5S007 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRRK2Q5S007 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LRRK2Q5S007 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRK2Q5S007 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.48■□□□□ 0.55
LRRK2Q5S007 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.48■□□□□ 0.55
LRRK2Q5S007 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.48■□□□□ 0.55
LRRK2Q5S007 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRRK2Q5S007 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRRK2Q5S007 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
LRRK2Q5S007 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRK2Q5S007 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRK2Q5S007 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRRK2Q5S007 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.48■□□□□ 0.55
LRRK2Q5S007 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRK2Q5S007 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LRRK2Q5S007 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRRK2Q5S007 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRK2Q5S007 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRK2Q5S007 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRK2Q5S007 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRK2Q5S007 LINC01960-201ENST00000563759 1884 ntBASIC18.48■□□□□ 0.55
LRRK2Q5S007 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.48■□□□□ 0.55
LRRK2Q5S007 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.48■□□□□ 0.55
LRRK2Q5S007 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.48■□□□□ 0.55
LRRK2Q5S007 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LRRK2Q5S007 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRK2Q5S007 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRK2Q5S007 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRK2Q5S007 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRK2Q5S007 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LRRK2Q5S007 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRK2Q5S007 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRK2Q5S007 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRK2Q5S007 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRK2Q5S007 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRK2Q5S007 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRK2Q5S007 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRK2Q5S007 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRK2Q5S007 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.47■□□□□ 0.55
LRRK2Q5S007 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRK2Q5S007 AL034346.1-201ENST00000568244 1277 ntBASIC18.47■□□□□ 0.55
LRRK2Q5S007 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.47■□□□□ 0.55
LRRK2Q5S007 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRK2Q5S007 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRK2Q5S007 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRK2Q5S007 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRK2Q5S007 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRK2Q5S007 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRK2Q5S007 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRK2Q5S007 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRK2Q5S007 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRRK2Q5S007 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRRK2Q5S007 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.46■□□□□ 0.55
LRRK2Q5S007 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.46■□□□□ 0.55
LRRK2Q5S007 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRK2Q5S007 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
LRRK2Q5S007 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRK2Q5S007 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRK2Q5S007 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRK2Q5S007 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
LRRK2Q5S007 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRK2Q5S007 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRK2Q5S007 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRK2Q5S007 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRRK2Q5S007 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRK2Q5S007 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.46■□□□□ 0.55
LRRK2Q5S007 AC243732.1-201ENST00000612648 864 ntBASIC18.46■□□□□ 0.55
LRRK2Q5S007 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.45■□□□□ 0.54
LRRK2Q5S007 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.45■□□□□ 0.54
LRRK2Q5S007 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRRK2Q5S007 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
LRRK2Q5S007 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.45■□□□□ 0.54
LRRK2Q5S007 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRK2Q5S007 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms