Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC15.66■□□□□ 0.1
CMC4P56277 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMC4P56277 TERT-206ENST00000508104 2486 ntTSL 5 BASIC15.66■□□□□ 0.1
CMC4P56277 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMC4P56277 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMC4P56277 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMC4P56277 METTL26-203ENST00000397664 604 ntTSL 2 BASIC15.66■□□□□ 0.1
CMC4P56277 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMC4P56277 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC15.66■□□□□ 0.1
CMC4P56277 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.66■□□□□ 0.1
CMC4P56277 AL137784.2-201ENST00000607332 1000 ntBASIC15.66■□□□□ 0.1
CMC4P56277 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC15.66■□□□□ 0.1
CMC4P56277 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CMC4P56277 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMC4P56277 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMC4P56277 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC15.66■□□□□ 0.1
CMC4P56277 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMC4P56277 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMC4P56277 AC010542.4-201ENST00000563151 1910 ntBASIC15.66■□□□□ 0.1
CMC4P56277 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.66■□□□□ 0.1
CMC4P56277 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMC4P56277 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CMC4P56277 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CMC4P56277 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CMC4P56277 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMC4P56277 STX5-203ENST00000394690 1568 ntTSL 5 BASIC15.66■□□□□ 0.1
CMC4P56277 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CMC4P56277 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMC4P56277 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMC4P56277 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CMC4P56277 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC15.65■□□□□ 0.1
CMC4P56277 AC244015.2-201ENST00000616358 1861 ntBASIC15.65■□□□□ 0.1
CMC4P56277 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CMC4P56277 NARF-205ENST00000412079 1760 ntTSL 5 BASIC15.65■□□□□ 0.1
CMC4P56277 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.65■□□□□ 0.1
CMC4P56277 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CMC4P56277 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
CMC4P56277 AC079834.2-201ENST00000609776 1949 ntBASIC15.65■□□□□ 0.1
CMC4P56277 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CMC4P56277 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CMC4P56277 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CMC4P56277 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CMC4P56277 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CMC4P56277 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.65■□□□□ 0.1
CMC4P56277 HSCB-202ENST00000398941 955 ntTSL 2 BASIC15.65■□□□□ 0.1
CMC4P56277 AC022517.1-201ENST00000592429 346 ntBASIC15.65■□□□□ 0.1
CMC4P56277 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CMC4P56277 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CMC4P56277 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CMC4P56277 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CMC4P56277 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CMC4P56277 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CMC4P56277 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CMC4P56277 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CMC4P56277 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
CMC4P56277 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
CMC4P56277 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CMC4P56277 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CMC4P56277 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CMC4P56277 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
CMC4P56277 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CMC4P56277 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CMC4P56277 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CMC4P56277 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CMC4P56277 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CMC4P56277 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CMC4P56277 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CMC4P56277 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CMC4P56277 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CMC4P56277 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CMC4P56277 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC15.64■□□□□ 0.09
CMC4P56277 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC15.64■□□□□ 0.09
CMC4P56277 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.64■□□□□ 0.09
CMC4P56277 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.64■□□□□ 0.09
CMC4P56277 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CMC4P56277 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CMC4P56277 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC15.64■□□□□ 0.09
CMC4P56277 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CMC4P56277 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CMC4P56277 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC15.63■□□□□ 0.09
CMC4P56277 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC15.63■□□□□ 0.09
CMC4P56277 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CMC4P56277 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CMC4P56277 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC15.63■□□□□ 0.09
CMC4P56277 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CMC4P56277 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.63■□□□□ 0.09
CMC4P56277 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CMC4P56277 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CMC4P56277 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC15.63■□□□□ 0.09
CMC4P56277 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC15.63■□□□□ 0.09
CMC4P56277 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
CMC4P56277 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CMC4P56277 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CMC4P56277 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CMC4P56277 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CMC4P56277 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CMC4P56277 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CMC4P56277 MFF-203ENST00000349901 1716 ntTSL 2 BASIC15.63■□□□□ 0.09
CMC4P56277 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CMC4P56277 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms