Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PDGFBP01127 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PDGFBP01127 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PDGFBP01127 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.4■■□□□ 1.02
PDGFBP01127 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.4■■□□□ 1.02
PDGFBP01127 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PDGFBP01127 AC061975.6-201ENST00000579045 1553 ntBASIC21.4■■□□□ 1.02
PDGFBP01127 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.39■■□□□ 1.02
PDGFBP01127 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PDGFBP01127 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
PDGFBP01127 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PDGFBP01127 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PDGFBP01127 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDGFBP01127 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDGFBP01127 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
PDGFBP01127 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.39■■□□□ 1.01
PDGFBP01127 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PDGFBP01127 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.39■■□□□ 1.01
PDGFBP01127 AC012306.2-201ENST00000609350 630 ntBASIC21.39■■□□□ 1.01
PDGFBP01127 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PDGFBP01127 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.39■■□□□ 1.01
PDGFBP01127 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
PDGFBP01127 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
PDGFBP01127 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDGFBP01127 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDGFBP01127 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDGFBP01127 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDGFBP01127 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.38■■□□□ 1.01
PDGFBP01127 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDGFBP01127 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.38■■□□□ 1.01
PDGFBP01127 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.38■■□□□ 1.01
PDGFBP01127 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.38■■□□□ 1.01
PDGFBP01127 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.38■■□□□ 1.01
PDGFBP01127 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.38■■□□□ 1.01
PDGFBP01127 AC097493.4-201ENST00000641197 219 ntBASIC21.38■■□□□ 1.01
PDGFBP01127 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDGFBP01127 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDGFBP01127 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PDGFBP01127 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDGFBP01127 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDGFBP01127 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDGFBP01127 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.37■■□□□ 1.01
PDGFBP01127 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.37■■□□□ 1.01
PDGFBP01127 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDGFBP01127 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDGFBP01127 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.37■■□□□ 1.01
PDGFBP01127 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDGFBP01127 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDGFBP01127 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDGFBP01127 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
PDGFBP01127 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.36■■□□□ 1.01
PDGFBP01127 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDGFBP01127 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDGFBP01127 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDGFBP01127 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.36■■□□□ 1.01
PDGFBP01127 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.36■■□□□ 1.01
PDGFBP01127 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.36■■□□□ 1.01
PDGFBP01127 AL049637.2-201ENST00000641778 930 ntBASIC21.36■■□□□ 1.01
PDGFBP01127 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDGFBP01127 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
PDGFBP01127 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDGFBP01127 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDGFBP01127 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDGFBP01127 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PDGFBP01127 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.36■■□□□ 1.01
PDGFBP01127 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDGFBP01127 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDGFBP01127 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDGFBP01127 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDGFBP01127 ARMC10P1-201ENST00000313754 855 ntBASIC21.35■■□□□ 1.01
PDGFBP01127 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDGFBP01127 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PDGFBP01127 TMPOP1-202ENST00000424642 1267 ntBASIC21.35■■□□□ 1.01
PDGFBP01127 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.35■■□□□ 1.01
PDGFBP01127 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.35■■□□□ 1.01
PDGFBP01127 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.35■■□□□ 1.01
PDGFBP01127 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PDGFBP01127 LINC01124-201ENST00000409786 2117 ntBASIC21.35■■□□□ 1.01
PDGFBP01127 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDGFBP01127 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDGFBP01127 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDGFBP01127 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDGFBP01127 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.34■■□□□ 1.01
PDGFBP01127 RN7SL850P-201ENST00000579959 291 ntBASIC21.34■■□□□ 1.01
PDGFBP01127 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDGFBP01127 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDGFBP01127 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
PDGFBP01127 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.34■■□□□ 1.01
PDGFBP01127 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
PDGFBP01127 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.33■■□□□ 1.01
PDGFBP01127 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PDGFBP01127 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PDGFBP01127 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDGFBP01127 POM121L13P-201ENST00000422362 380 ntBASIC21.33■■□□□ 1.01
PDGFBP01127 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.33■■□□□ 1.01
PDGFBP01127 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.33■■□□□ 1.01
PDGFBP01127 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.33■■□□□ 1.01
PDGFBP01127 AL589743.5-201ENST00000616611 1050 ntBASIC21.33■■□□□ 1.01
PDGFBP01127 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PDGFBP01127 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms