Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SOD1P00441 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SOD1P00441 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
SOD1P00441 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
SOD1P00441 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SOD1P00441 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.82■□□□□ 0.92
SOD1P00441 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SOD1P00441 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SOD1P00441 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SOD1P00441 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SOD1P00441 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SOD1P00441 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SOD1P00441 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SOD1P00441 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SOD1P00441 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SOD1P00441 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SOD1P00441 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SOD1P00441 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SOD1P00441 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.81■□□□□ 0.92
SOD1P00441 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SOD1P00441 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.81■□□□□ 0.92
SOD1P00441 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.81■□□□□ 0.92
SOD1P00441 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SOD1P00441 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.81■□□□□ 0.92
SOD1P00441 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.81■□□□□ 0.92
SOD1P00441 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SOD1P00441 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
SOD1P00441 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SOD1P00441 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOD1P00441 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.8■□□□□ 0.92
SOD1P00441 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SOD1P00441 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOD1P00441 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOD1P00441 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SOD1P00441 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.8■□□□□ 0.92
SOD1P00441 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.8■□□□□ 0.92
SOD1P00441 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.8■□□□□ 0.92
SOD1P00441 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.8■□□□□ 0.92
SOD1P00441 AC120498.10-201ENST00000621827 505 ntBASIC20.8■□□□□ 0.92
SOD1P00441 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SOD1P00441 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOD1P00441 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SOD1P00441 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.8■□□□□ 0.92
SOD1P00441 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOD1P00441 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOD1P00441 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOD1P00441 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.8■□□□□ 0.92
SOD1P00441 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOD1P00441 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOD1P00441 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOD1P00441 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOD1P00441 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.79■□□□□ 0.92
SOD1P00441 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOD1P00441 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOD1P00441 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.79■□□□□ 0.92
SOD1P00441 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOD1P00441 TERF1P5-201ENST00000477545 1207 ntBASIC20.79■□□□□ 0.92
SOD1P00441 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOD1P00441 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.79■□□□□ 0.92
SOD1P00441 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.79■□□□□ 0.92
SOD1P00441 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.79■□□□□ 0.92
SOD1P00441 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.79■□□□□ 0.92
SOD1P00441 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
SOD1P00441 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.79■□□□□ 0.92
SOD1P00441 CLDN5-201ENST00000403084 2357 ntBASIC20.79■□□□□ 0.92
SOD1P00441 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SOD1P00441 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOD1P00441 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOD1P00441 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOD1P00441 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOD1P00441 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOD1P00441 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOD1P00441 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.78■□□□□ 0.92
SOD1P00441 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SOD1P00441 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SOD1P00441 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.78■□□□□ 0.92
SOD1P00441 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.78■□□□□ 0.92
SOD1P00441 AC231657.2-201ENST00000624556 255 ntBASIC20.78■□□□□ 0.92
SOD1P00441 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.78■□□□□ 0.92
SOD1P00441 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SOD1P00441 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOD1P00441 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.78■□□□□ 0.92
SOD1P00441 RBM17P2-201ENST00000616397 1405 ntBASIC20.78■□□□□ 0.92
SOD1P00441 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.78■□□□□ 0.92
SOD1P00441 FBXW4P1-201ENST00000426721 2239 ntBASIC20.77■□□□□ 0.92
SOD1P00441 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.77■□□□□ 0.92
SOD1P00441 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SOD1P00441 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.77■□□□□ 0.92
SOD1P00441 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SOD1P00441 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.77■□□□□ 0.92
SOD1P00441 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.77■□□□□ 0.92
SOD1P00441 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SOD1P00441 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SOD1P00441 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOD1P00441 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.77■□□□□ 0.92
SOD1P00441 AL050303.2-201ENST00000619798 666 ntBASIC20.77■□□□□ 0.92
SOD1P00441 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.77■□□□□ 0.92
SOD1P00441 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.77■□□□□ 0.91
SOD1P00441 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
SOD1P00441 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms