Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19■□□□□ 0.63
ZIC3O60481 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ZIC3O60481 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZIC3O60481 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZIC3O60481 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZIC3O60481 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZIC3O60481 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19■□□□□ 0.63
ZIC3O60481 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZIC3O60481 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19■□□□□ 0.63
ZIC3O60481 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZIC3O60481 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19■□□□□ 0.63
ZIC3O60481 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19■□□□□ 0.63
ZIC3O60481 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ZIC3O60481 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZIC3O60481 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19■□□□□ 0.63
ZIC3O60481 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZIC3O60481 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ZIC3O60481 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZIC3O60481 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZIC3O60481 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.99■□□□□ 0.63
ZIC3O60481 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZIC3O60481 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.99■□□□□ 0.63
ZIC3O60481 AC090192.1-201ENST00000517740 490 ntBASIC18.99■□□□□ 0.63
ZIC3O60481 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.99■□□□□ 0.63
ZIC3O60481 AC010536.3-201ENST00000620306 533 ntBASIC18.99■□□□□ 0.63
ZIC3O60481 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ZIC3O60481 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.99■□□□□ 0.63
ZIC3O60481 AC079834.2-201ENST00000609776 1949 ntBASIC18.99■□□□□ 0.63
ZIC3O60481 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.99■□□□□ 0.63
ZIC3O60481 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZIC3O60481 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.99■□□□□ 0.63
ZIC3O60481 AC244015.2-201ENST00000616358 1861 ntBASIC18.99■□□□□ 0.63
ZIC3O60481 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZIC3O60481 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZIC3O60481 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZIC3O60481 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZIC3O60481 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZIC3O60481 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZIC3O60481 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.98■□□□□ 0.63
ZIC3O60481 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZIC3O60481 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.98■□□□□ 0.63
ZIC3O60481 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.98■□□□□ 0.63
ZIC3O60481 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
ZIC3O60481 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
ZIC3O60481 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZIC3O60481 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ZIC3O60481 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZIC3O60481 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZIC3O60481 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZIC3O60481 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZIC3O60481 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZIC3O60481 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZIC3O60481 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZIC3O60481 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZIC3O60481 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.97■□□□□ 0.63
ZIC3O60481 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZIC3O60481 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ZIC3O60481 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ZIC3O60481 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ZIC3O60481 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.97■□□□□ 0.63
ZIC3O60481 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZIC3O60481 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
ZIC3O60481 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
ZIC3O60481 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZIC3O60481 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZIC3O60481 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZIC3O60481 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZIC3O60481 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.97■□□□□ 0.63
ZIC3O60481 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.97■□□□□ 0.63
ZIC3O60481 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZIC3O60481 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.97■□□□□ 0.63
ZIC3O60481 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZIC3O60481 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZIC3O60481 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZIC3O60481 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZIC3O60481 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.96■□□□□ 0.63
ZIC3O60481 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZIC3O60481 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZIC3O60481 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZIC3O60481 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZIC3O60481 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZIC3O60481 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZIC3O60481 TERF1P5-201ENST00000477545 1207 ntBASIC18.96■□□□□ 0.63
ZIC3O60481 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.96■□□□□ 0.63
ZIC3O60481 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.96■□□□□ 0.63
ZIC3O60481 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ZIC3O60481 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.96■□□□□ 0.63
ZIC3O60481 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
ZIC3O60481 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
ZIC3O60481 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZIC3O60481 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZIC3O60481 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZIC3O60481 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.96■□□□□ 0.63
ZIC3O60481 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZIC3O60481 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZIC3O60481 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.96■□□□□ 0.63
ZIC3O60481 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ZIC3O60481 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZIC3O60481 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
ZIC3O60481 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms