Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-2A0A140T8N6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-2A0A140T8N6 Gm9885-202ENSMUST00000186234 2209 ntBASIC12.86□□□□□ -0.35
Trbv13-2A0A140T8N6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-2A0A140T8N6 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trbv13-2A0A140T8N6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-2A0A140T8N6 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-2A0A140T8N6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-2A0A140T8N6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-2A0A140T8N6 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-2A0A140T8N6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC12.86□□□□□ -0.35
Trbv13-2A0A140T8N6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-2A0A140T8N6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-2A0A140T8N6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-2A0A140T8N6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trbv13-2A0A140T8N6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-2A0A140T8N6 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC12.86□□□□□ -0.35
Trbv13-2A0A140T8N6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-2A0A140T8N6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-2A0A140T8N6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-2A0A140T8N6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trbv13-2A0A140T8N6 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-2A0A140T8N6 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trbv13-2A0A140T8N6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Gm8495-201ENSMUST00000188740 694 ntBASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 AV356131-201ENSMUST00000206201 750 ntBASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Gm7514-201ENSMUST00000209475 934 ntBASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Gm38342-201ENSMUST00000195710 2980 ntBASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-2A0A140T8N6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-2A0A140T8N6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-2A0A140T8N6 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-2A0A140T8N6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-2A0A140T8N6 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trbv13-2A0A140T8N6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-2A0A140T8N6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trbv13-2A0A140T8N6 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-2A0A140T8N6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trbv13-2A0A140T8N6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC12.84□□□□□ -0.35
Trbv13-2A0A140T8N6 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-2A0A140T8N6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-2A0A140T8N6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC12.84□□□□□ -0.35
Trbv13-2A0A140T8N6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-2A0A140T8N6 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-2A0A140T8N6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-2A0A140T8N6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-2A0A140T8N6 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-2A0A140T8N6 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-2A0A140T8N6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC12.84□□□□□ -0.35
Trbv13-2A0A140T8N6 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trbv13-2A0A140T8N6 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-2A0A140T8N6 Gm10167-201ENSMUST00000150411 1479 ntBASIC12.84□□□□□ -0.35
Trbv13-2A0A140T8N6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-2A0A140T8N6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-2A0A140T8N6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trbv13-2A0A140T8N6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trbv13-2A0A140T8N6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trbv13-2A0A140T8N6 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trbv13-2A0A140T8N6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-2A0A140T8N6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-2A0A140T8N6 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC12.83□□□□□ -0.36
Trbv13-2A0A140T8N6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-2A0A140T8N6 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-2A0A140T8N6 Gm6627-201ENSMUST00000218299 2386 ntBASIC12.83□□□□□ -0.36
Trbv13-2A0A140T8N6 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-2A0A140T8N6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-2A0A140T8N6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trbv13-2A0A140T8N6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-2A0A140T8N6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC12.83□□□□□ -0.36
Trbv13-2A0A140T8N6 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-2A0A140T8N6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-2A0A140T8N6 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-2A0A140T8N6 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-2A0A140T8N6 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-2A0A140T8N6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 110.9 ms