Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16d-dv11A0A075B617 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16d-dv11A0A075B617 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16d-dv11A0A075B617 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16d-dv11A0A075B617 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16d-dv11A0A075B617 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav16d-dv11A0A075B617 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16d-dv11A0A075B617 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16d-dv11A0A075B617 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav16d-dv11A0A075B617 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16d-dv11A0A075B617 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16d-dv11A0A075B617 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16d-dv11A0A075B617 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16d-dv11A0A075B617 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16d-dv11A0A075B617 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Trav16d-dv11A0A075B617 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16d-dv11A0A075B617 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16d-dv11A0A075B617 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.59□□□□□ -0.23
Trav16d-dv11A0A075B617 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16d-dv11A0A075B617 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16d-dv11A0A075B617 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16d-dv11A0A075B617 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16d-dv11A0A075B617 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16d-dv11A0A075B617 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16d-dv11A0A075B617 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16d-dv11A0A075B617 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav16d-dv11A0A075B617 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16d-dv11A0A075B617 Gm43566-201ENSMUST00000196851 808 ntBASIC13.59□□□□□ -0.23
Trav16d-dv11A0A075B617 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Trav16d-dv11A0A075B617 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16d-dv11A0A075B617 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16d-dv11A0A075B617 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16d-dv11A0A075B617 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16d-dv11A0A075B617 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16d-dv11A0A075B617 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16d-dv11A0A075B617 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16d-dv11A0A075B617 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav16d-dv11A0A075B617 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav16d-dv11A0A075B617 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16d-dv11A0A075B617 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16d-dv11A0A075B617 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Trav16d-dv11A0A075B617 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16d-dv11A0A075B617 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav16d-dv11A0A075B617 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16d-dv11A0A075B617 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC13.58□□□□□ -0.24
Trav16d-dv11A0A075B617 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16d-dv11A0A075B617 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16d-dv11A0A075B617 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trav16d-dv11A0A075B617 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16d-dv11A0A075B617 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16d-dv11A0A075B617 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16d-dv11A0A075B617 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16d-dv11A0A075B617 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16d-dv11A0A075B617 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16d-dv11A0A075B617 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16d-dv11A0A075B617 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16d-dv11A0A075B617 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav16d-dv11A0A075B617 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav16d-dv11A0A075B617 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16d-dv11A0A075B617 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16d-dv11A0A075B617 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16d-dv11A0A075B617 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13.57□□□□□ -0.24
Trav16d-dv11A0A075B617 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16d-dv11A0A075B617 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16d-dv11A0A075B617 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav16d-dv11A0A075B617 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav16d-dv11A0A075B617 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16d-dv11A0A075B617 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav16d-dv11A0A075B617 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16d-dv11A0A075B617 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Trav16d-dv11A0A075B617 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16d-dv11A0A075B617 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Trav16d-dv11A0A075B617 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav16d-dv11A0A075B617 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16d-dv11A0A075B617 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16d-dv11A0A075B617 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16d-dv11A0A075B617 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav16d-dv11A0A075B617 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16d-dv11A0A075B617 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16d-dv11A0A075B617 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16d-dv11A0A075B617 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16d-dv11A0A075B617 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16d-dv11A0A075B617 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav16d-dv11A0A075B617 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16d-dv11A0A075B617 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav16d-dv11A0A075B617 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16d-dv11A0A075B617 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Trav16d-dv11A0A075B617 Gm42911-201ENSMUST00000199360 1630 ntBASIC13.56□□□□□ -0.24
Trav16d-dv11A0A075B617 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16d-dv11A0A075B617 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16d-dv11A0A075B617 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav16d-dv11A0A075B617 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav16d-dv11A0A075B617 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16d-dv11A0A075B617 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16d-dv11A0A075B617 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16d-dv11A0A075B617 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16d-dv11A0A075B617 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16d-dv11A0A075B617 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav16d-dv11A0A075B617 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav16d-dv11A0A075B617 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms