Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn6Q9Z262 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn6Q9Z262 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cldn6Q9Z262 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cldn6Q9Z262 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn6Q9Z262 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn6Q9Z262 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.37■□□□□ 0.37
Cldn6Q9Z262 Gm42642-201ENSMUST00000200683 355 ntBASIC17.37■□□□□ 0.37
Cldn6Q9Z262 Gm10033-202ENSMUST00000211874 928 ntBASIC17.37■□□□□ 0.37
Cldn6Q9Z262 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn6Q9Z262 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn6Q9Z262 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.37■□□□□ 0.37
Cldn6Q9Z262 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn6Q9Z262 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn6Q9Z262 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn6Q9Z262 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn6Q9Z262 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn6Q9Z262 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn6Q9Z262 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn6Q9Z262 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.36■□□□□ 0.37
Cldn6Q9Z262 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn6Q9Z262 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn6Q9Z262 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn6Q9Z262 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn6Q9Z262 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn6Q9Z262 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cldn6Q9Z262 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn6Q9Z262 Gm18671-201ENSMUST00000214826 683 ntBASIC17.35■□□□□ 0.37
Cldn6Q9Z262 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.35■□□□□ 0.37
Cldn6Q9Z262 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cldn6Q9Z262 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
Cldn6Q9Z262 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn6Q9Z262 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn6Q9Z262 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn6Q9Z262 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Cldn6Q9Z262 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn6Q9Z262 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn6Q9Z262 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn6Q9Z262 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn6Q9Z262 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.35■□□□□ 0.37
Cldn6Q9Z262 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn6Q9Z262 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Cldn6Q9Z262 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
Cldn6Q9Z262 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Cldn6Q9Z262 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn6Q9Z262 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Cldn6Q9Z262 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.34■□□□□ 0.37
Cldn6Q9Z262 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
Cldn6Q9Z262 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.34■□□□□ 0.37
Cldn6Q9Z262 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn6Q9Z262 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.34■□□□□ 0.37
Cldn6Q9Z262 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn6Q9Z262 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn6Q9Z262 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn6Q9Z262 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cldn6Q9Z262 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cldn6Q9Z262 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cldn6Q9Z262 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cldn6Q9Z262 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cldn6Q9Z262 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cldn6Q9Z262 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cldn6Q9Z262 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cldn6Q9Z262 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.33■□□□□ 0.36
Cldn6Q9Z262 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Cldn6Q9Z262 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cldn6Q9Z262 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn6Q9Z262 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.33■□□□□ 0.36
Cldn6Q9Z262 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cldn6Q9Z262 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn6Q9Z262 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn6Q9Z262 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn6Q9Z262 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn6Q9Z262 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Cldn6Q9Z262 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn6Q9Z262 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn6Q9Z262 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn6Q9Z262 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
Cldn6Q9Z262 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn6Q9Z262 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn6Q9Z262 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn6Q9Z262 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn6Q9Z262 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn6Q9Z262 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn6Q9Z262 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cldn6Q9Z262 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cldn6Q9Z262 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn6Q9Z262 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn6Q9Z262 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn6Q9Z262 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn6Q9Z262 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn6Q9Z262 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cldn6Q9Z262 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn6Q9Z262 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn6Q9Z262 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cldn6Q9Z262 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn6Q9Z262 Gm18284-201ENSMUST00000172604 624 ntBASIC17.31■□□□□ 0.36
Cldn6Q9Z262 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
Cldn6Q9Z262 Gm7514-201ENSMUST00000209475 934 ntBASIC17.31■□□□□ 0.36
Cldn6Q9Z262 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn6Q9Z262 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms