Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn5Q9WVD4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Clcn5Q9WVD4 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Clcn5Q9WVD4 Gm37055-201ENSMUST00000191866 133 ntBASIC19.15■□□□□ 0.66
Clcn5Q9WVD4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn5Q9WVD4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.15■□□□□ 0.66
Clcn5Q9WVD4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Clcn5Q9WVD4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
Clcn5Q9WVD4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn5Q9WVD4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn5Q9WVD4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Clcn5Q9WVD4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Clcn5Q9WVD4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Clcn5Q9WVD4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Clcn5Q9WVD4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Clcn5Q9WVD4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Clcn5Q9WVD4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn5Q9WVD4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Clcn5Q9WVD4 Gm18666-201ENSMUST00000190039 958 ntBASIC19.14■□□□□ 0.65
Clcn5Q9WVD4 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn5Q9WVD4 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Clcn5Q9WVD4 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.14■□□□□ 0.65
Clcn5Q9WVD4 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.14■□□□□ 0.65
Clcn5Q9WVD4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Clcn5Q9WVD4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn5Q9WVD4 Dio3-201ENSMUST00000097228 1449 ntBASIC19.14■□□□□ 0.65
Clcn5Q9WVD4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Clcn5Q9WVD4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.14■□□□□ 0.65
Clcn5Q9WVD4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn5Q9WVD4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Clcn5Q9WVD4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn5Q9WVD4 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Clcn5Q9WVD4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn5Q9WVD4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Clcn5Q9WVD4 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Clcn5Q9WVD4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.13■□□□□ 0.65
Clcn5Q9WVD4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn5Q9WVD4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn5Q9WVD4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Clcn5Q9WVD4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn5Q9WVD4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
Clcn5Q9WVD4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Clcn5Q9WVD4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Clcn5Q9WVD4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn5Q9WVD4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Clcn5Q9WVD4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Clcn5Q9WVD4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.12■□□□□ 0.65
Clcn5Q9WVD4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn5Q9WVD4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn5Q9WVD4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Clcn5Q9WVD4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn5Q9WVD4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.11■□□□□ 0.65
Clcn5Q9WVD4 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.11■□□□□ 0.65
Clcn5Q9WVD4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn5Q9WVD4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn5Q9WVD4 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.11■□□□□ 0.65
Clcn5Q9WVD4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn5Q9WVD4 Gm9987-201ENSMUST00000069768 567 ntBASIC19.11■□□□□ 0.65
Clcn5Q9WVD4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn5Q9WVD4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn5Q9WVD4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn5Q9WVD4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Clcn5Q9WVD4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Clcn5Q9WVD4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clcn5Q9WVD4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clcn5Q9WVD4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.1■□□□□ 0.65
Clcn5Q9WVD4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clcn5Q9WVD4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Clcn5Q9WVD4 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Clcn5Q9WVD4 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clcn5Q9WVD4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clcn5Q9WVD4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clcn5Q9WVD4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Clcn5Q9WVD4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Clcn5Q9WVD4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn5Q9WVD4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn5Q9WVD4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn5Q9WVD4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.09■□□□□ 0.65
Clcn5Q9WVD4 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn5Q9WVD4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn5Q9WVD4 Mir1199-201ENSMUST00000117015 119 ntBASIC19.09■□□□□ 0.65
Clcn5Q9WVD4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Clcn5Q9WVD4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
Clcn5Q9WVD4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn5Q9WVD4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn5Q9WVD4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn5Q9WVD4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clcn5Q9WVD4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clcn5Q9WVD4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn5Q9WVD4 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn5Q9WVD4 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.08■□□□□ 0.64
Clcn5Q9WVD4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Clcn5Q9WVD4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.08■□□□□ 0.64
Clcn5Q9WVD4 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.08■□□□□ 0.64
Clcn5Q9WVD4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.08■□□□□ 0.64
Clcn5Q9WVD4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn5Q9WVD4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn5Q9WVD4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn5Q9WVD4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn5Q9WVD4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms