Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.94■■□□□ 1.26
CDT1Q9H211 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CDT1Q9H211 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDT1Q9H211 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDT1Q9H211 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDT1Q9H211 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CDT1Q9H211 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CDT1Q9H211 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
CDT1Q9H211 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
CDT1Q9H211 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
CDT1Q9H211 CROCCP5-201ENST00000436658 830 ntBASIC22.93■■□□□ 1.26
CDT1Q9H211 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.93■■□□□ 1.26
CDT1Q9H211 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.93■■□□□ 1.26
CDT1Q9H211 AC120498.10-201ENST00000621827 505 ntBASIC22.93■■□□□ 1.26
CDT1Q9H211 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CDT1Q9H211 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.93■■□□□ 1.26
CDT1Q9H211 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.92■■□□□ 1.26
CDT1Q9H211 KRT16P2-201ENST00000414673 1423 ntBASIC22.92■■□□□ 1.26
CDT1Q9H211 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDT1Q9H211 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDT1Q9H211 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
CDT1Q9H211 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.92■■□□□ 1.26
CDT1Q9H211 CNN2P6-201ENST00000439038 900 ntBASIC22.92■■□□□ 1.26
CDT1Q9H211 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDT1Q9H211 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.92■■□□□ 1.26
CDT1Q9H211 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.92■■□□□ 1.26
CDT1Q9H211 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
CDT1Q9H211 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
CDT1Q9H211 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDT1Q9H211 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.92■■□□□ 1.26
CDT1Q9H211 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.92■■□□□ 1.26
CDT1Q9H211 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.91■■□□□ 1.26
CDT1Q9H211 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CDT1Q9H211 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CDT1Q9H211 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CDT1Q9H211 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
CDT1Q9H211 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CDT1Q9H211 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
CDT1Q9H211 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.91■■□□□ 1.26
CDT1Q9H211 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.91■■□□□ 1.26
CDT1Q9H211 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.91■■□□□ 1.26
CDT1Q9H211 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.91■■□□□ 1.26
CDT1Q9H211 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.91■■□□□ 1.26
CDT1Q9H211 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.91■■□□□ 1.26
CDT1Q9H211 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CDT1Q9H211 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.91■■□□□ 1.26
CDT1Q9H211 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CDT1Q9H211 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CDT1Q9H211 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
CDT1Q9H211 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
CDT1Q9H211 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.9■■□□□ 1.26
CDT1Q9H211 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CDT1Q9H211 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.9■■□□□ 1.26
CDT1Q9H211 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
CDT1Q9H211 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.9■■□□□ 1.26
CDT1Q9H211 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.9■■□□□ 1.26
CDT1Q9H211 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.9■■□□□ 1.26
CDT1Q9H211 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.9■■□□□ 1.26
CDT1Q9H211 AC231657.2-201ENST00000624556 255 ntBASIC22.9■■□□□ 1.26
CDT1Q9H211 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.9■■□□□ 1.26
CDT1Q9H211 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.9■■□□□ 1.26
CDT1Q9H211 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
CDT1Q9H211 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CDT1Q9H211 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.89■■□□□ 1.26
CDT1Q9H211 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
CDT1Q9H211 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
CDT1Q9H211 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.89■■□□□ 1.26
CDT1Q9H211 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CDT1Q9H211 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.26
CDT1Q9H211 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
CDT1Q9H211 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.89■■□□□ 1.25
CDT1Q9H211 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
CDT1Q9H211 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CDT1Q9H211 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CDT1Q9H211 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.88■■□□□ 1.25
CDT1Q9H211 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CDT1Q9H211 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
CDT1Q9H211 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
CDT1Q9H211 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.88■■□□□ 1.25
CDT1Q9H211 MIR663A-201ENST00000385250 93 ntBASIC22.88■■□□□ 1.25
CDT1Q9H211 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.88■■□□□ 1.25
CDT1Q9H211 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.88■■□□□ 1.25
CDT1Q9H211 TERF1P5-201ENST00000477545 1207 ntBASIC22.88■■□□□ 1.25
CDT1Q9H211 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.88■■□□□ 1.25
CDT1Q9H211 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.88■■□□□ 1.25
CDT1Q9H211 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.88■■□□□ 1.25
CDT1Q9H211 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.88■■□□□ 1.25
CDT1Q9H211 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.88■■□□□ 1.25
CDT1Q9H211 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CDT1Q9H211 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.88■■□□□ 1.25
CDT1Q9H211 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CDT1Q9H211 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDT1Q9H211 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDT1Q9H211 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDT1Q9H211 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
CDT1Q9H211 AC007322.1-201ENST00000426983 750 ntBASIC22.87■■□□□ 1.25
CDT1Q9H211 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CDT1Q9H211 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.87■■□□□ 1.25
CDT1Q9H211 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.87■■□□□ 1.25
CDT1Q9H211 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms