Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.85■□□□□ 0.93
TRIM4Q9C037 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM4Q9C037 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM4Q9C037 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.85■□□□□ 0.93
TRIM4Q9C037 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.85■□□□□ 0.93
TRIM4Q9C037 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.85■□□□□ 0.93
TRIM4Q9C037 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TRIM4Q9C037 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TRIM4Q9C037 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM4Q9C037 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.84■□□□□ 0.93
TRIM4Q9C037 AC026310.3-201ENST00000625186 2373 ntBASIC20.84■□□□□ 0.93
TRIM4Q9C037 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.84■□□□□ 0.93
TRIM4Q9C037 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.84■□□□□ 0.93
TRIM4Q9C037 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM4Q9C037 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.84■□□□□ 0.93
TRIM4Q9C037 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
TRIM4Q9C037 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM4Q9C037 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM4Q9C037 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM4Q9C037 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM4Q9C037 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM4Q9C037 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM4Q9C037 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
TRIM4Q9C037 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
TRIM4Q9C037 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM4Q9C037 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM4Q9C037 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM4Q9C037 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.83■□□□□ 0.93
TRIM4Q9C037 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.83■□□□□ 0.93
TRIM4Q9C037 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM4Q9C037 DUX4L4-201ENST00000566884 1269 ntBASIC20.83■□□□□ 0.93
TRIM4Q9C037 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.83■□□□□ 0.93
TRIM4Q9C037 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.83■□□□□ 0.93
TRIM4Q9C037 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.83■□□□□ 0.93
TRIM4Q9C037 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.83■□□□□ 0.93
TRIM4Q9C037 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM4Q9C037 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM4Q9C037 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM4Q9C037 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM4Q9C037 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM4Q9C037 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM4Q9C037 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM4Q9C037 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM4Q9C037 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
TRIM4Q9C037 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TRIM4Q9C037 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM4Q9C037 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM4Q9C037 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.82■□□□□ 0.92
TRIM4Q9C037 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM4Q9C037 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.82■□□□□ 0.92
TRIM4Q9C037 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM4Q9C037 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM4Q9C037 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.82■□□□□ 0.92
TRIM4Q9C037 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM4Q9C037 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.82■□□□□ 0.92
TRIM4Q9C037 AC136469.2-201ENST00000623944 1028 ntBASIC20.82■□□□□ 0.92
TRIM4Q9C037 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM4Q9C037 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.82■□□□□ 0.92
TRIM4Q9C037 AC139530.1-201ENST00000575312 1977 ntBASIC20.82■□□□□ 0.92
TRIM4Q9C037 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM4Q9C037 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM4Q9C037 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM4Q9C037 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM4Q9C037 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM4Q9C037 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM4Q9C037 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TRIM4Q9C037 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.81■□□□□ 0.92
TRIM4Q9C037 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM4Q9C037 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM4Q9C037 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM4Q9C037 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM4Q9C037 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TRIM4Q9C037 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
TRIM4Q9C037 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM4Q9C037 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.81■□□□□ 0.92
TRIM4Q9C037 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
TRIM4Q9C037 MIR6084-201ENST00000622012 110 ntBASIC20.81■□□□□ 0.92
TRIM4Q9C037 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.81■□□□□ 0.92
TRIM4Q9C037 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM4Q9C037 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.81■□□□□ 0.92
TRIM4Q9C037 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.81■□□□□ 0.92
TRIM4Q9C037 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM4Q9C037 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.8■□□□□ 0.92
TRIM4Q9C037 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM4Q9C037 AC080038.3-201ENST00000623346 1952 ntBASIC20.8■□□□□ 0.92
TRIM4Q9C037 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM4Q9C037 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
TRIM4Q9C037 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM4Q9C037 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TRIM4Q9C037 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM4Q9C037 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM4Q9C037 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM4Q9C037 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM4Q9C037 C17orf82-201ENST00000623772 1530 ntBASIC20.79■□□□□ 0.92
TRIM4Q9C037 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TRIM4Q9C037 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM4Q9C037 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM4Q9C037 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
TRIM4Q9C037 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM4Q9C037 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms