Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
SSBP3Q9BWW4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.56■□□□□ 0.4
SSBP3Q9BWW4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSBP3Q9BWW4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSBP3Q9BWW4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSBP3Q9BWW4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SSBP3Q9BWW4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.56■□□□□ 0.4
SSBP3Q9BWW4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.56■□□□□ 0.4
SSBP3Q9BWW4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SSBP3Q9BWW4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.56■□□□□ 0.4
SSBP3Q9BWW4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.56■□□□□ 0.4
SSBP3Q9BWW4 AC008175.2-201ENST00000612840 297 ntBASIC17.56■□□□□ 0.4
SSBP3Q9BWW4 MYCNOS-205ENST00000641950 531 ntBASIC17.56■□□□□ 0.4
SSBP3Q9BWW4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
SSBP3Q9BWW4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSBP3Q9BWW4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSBP3Q9BWW4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.56■□□□□ 0.4
SSBP3Q9BWW4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 MFSD11-216ENST00000590393 1141 ntBASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 AC120498.10-201ENST00000621827 505 ntBASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 AC003102.1-202ENST00000563394 1796 ntBASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSBP3Q9BWW4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSBP3Q9BWW4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.54■□□□□ 0.4
SSBP3Q9BWW4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSBP3Q9BWW4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSBP3Q9BWW4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SSBP3Q9BWW4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.54■□□□□ 0.4
SSBP3Q9BWW4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSBP3Q9BWW4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.54■□□□□ 0.4
SSBP3Q9BWW4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SSBP3Q9BWW4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.54■□□□□ 0.4
SSBP3Q9BWW4 GUSBP5-202ENST00000510805 1989 ntBASIC17.54■□□□□ 0.4
SSBP3Q9BWW4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSBP3Q9BWW4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSBP3Q9BWW4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSBP3Q9BWW4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSBP3Q9BWW4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSBP3Q9BWW4 CDCA4P2-201ENST00000441182 718 ntBASIC17.54■□□□□ 0.4
SSBP3Q9BWW4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SSBP3Q9BWW4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.54■□□□□ 0.4
SSBP3Q9BWW4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SSBP3Q9BWW4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.54■□□□□ 0.4
SSBP3Q9BWW4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSBP3Q9BWW4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSBP3Q9BWW4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSBP3Q9BWW4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSBP3Q9BWW4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSBP3Q9BWW4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSBP3Q9BWW4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSBP3Q9BWW4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSBP3Q9BWW4 FAM99A-202ENST00000538190 1989 ntBASIC17.53■□□□□ 0.4
SSBP3Q9BWW4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSBP3Q9BWW4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SSBP3Q9BWW4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSBP3Q9BWW4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSBP3Q9BWW4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.53■□□□□ 0.4
SSBP3Q9BWW4 AC026185.1-201ENST00000445748 174 ntBASIC17.53■□□□□ 0.4
SSBP3Q9BWW4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSBP3Q9BWW4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.53■□□□□ 0.4
SSBP3Q9BWW4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.53■□□□□ 0.4
SSBP3Q9BWW4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSBP3Q9BWW4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSBP3Q9BWW4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSBP3Q9BWW4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSBP3Q9BWW4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSBP3Q9BWW4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.53■□□□□ 0.4
SSBP3Q9BWW4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSBP3Q9BWW4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms